RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 MAPK7Q13164 816 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 TOB2Q14106 344 aaPredicted RBP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 SLC45A4Q5BKX6 768 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZPBP2Q6X784 338 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 DDX42Q86XP3 938 aaKnown RBP eCLIP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 BBS7Q8IWZ6 715 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 FBXL16Q8N461 479 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 FBXO39Q8N4B4 442 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 IFI44Q8TCB0 444 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 LEO1Q8WVC0 666 aaPredicted RBP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 TNFRSF25Q93038 417 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 APOLD1Q96LR9 279 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 RUSC1Q9BVN2 902 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 SGK2Q9HBY8 427 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZSWIM6Q9HCJ5 1215 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 DDX43Q9NXZ2 648 aaKnown RBP9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 KIAA1024Q9UPX6 916 aa9.88□□□□□ -0.83
PPP1R3E-204ENST00000559942 SCN8AQ9UQD0 1980 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZNF840PA6NDX5 716 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 KPNA7A9QM74 516 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 NEDD8-MDP1E9PL57 170 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 E9PMD0 336 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 WNT9AO14904 365 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 NVLO15381 856 aaKnown RBP9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 FFAR2O15552 330 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 TCEA3O75764 348 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 PAX3P23760 479 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 UGT1A5P35504 534 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 EVCP57679 992 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 IFRD2Q12894 506 aaPredicted RBP9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 MRPL49Q13405 166 aaKnown RBP9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 GDF7Q7Z4P5 450 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZFAND4Q86XD8 727 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 PDCL2Q8N4E4 241 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 TMEM161BQ8NDZ6 487 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 TPCN2Q8NHX9 752 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 EBF2Q9HAK2 575 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 USP29Q9HBJ7 922 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 SLC5A6Q9Y289 635 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 TP53TG5Q9Y2B4 290 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 SH3BP1Q9Y3L3 701 aa9.87□□□□□ -0.83
PPP1R3E-204ENST00000559942 TACC2O95359 2948 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 FAM47DPA6NHR8 397 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 OGTO15294 1046 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 FAM189A1O60320 539 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 CACNG3O60359 315 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 ATP2C2O75185 946 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 OAS1P00973 400 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 IRF1P10914 325 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 CD99P14209 185 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 LIG4P49917 911 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 CDH8P55286 799 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 MYL7Q01449 175 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 EIF3IQ13347 325 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 ENPP2Q13822 863 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 SV2CQ496J9 727 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 TPGS1Q6ZTW0 290 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 DENND5BQ6ZUT9 1274 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 CXXC5Q7LFL8 322 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 OSTM1Q86WC4 334 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 DTX1Q86Y01 620 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 BHMTQ93088 406 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 WBP2Q969T9 261 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 PKMYT1Q99640 499 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 L1RE1Q9UN81 338 aa9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 PRRC2CQ9Y520 2896 aaKnown RBP9.86□□□□□ -0.83
PPP1R3E-204ENST00000559942 MN1Q10571 1320 aaPredicted RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 TCP11X1B4DZS4 312 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 OLFM2O95897 454 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 EPHX1P07099 455 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 ADRB2P07550 413 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 NR1D1P20393 614 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 BDNFP23560 247 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 DGKAP23743 735 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 ANXA13P27216 316 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 LEPRP48357 1165 aaKnown RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 HARS2P49590 506 aaKnown RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 DGKGP49619 791 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 ACOT2P49753 483 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 VASPP50552 380 aaPredicted RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 PSMC1P62191 440 aaKnown RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 TAF10Q12962 218 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 DHX8Q14562 1220 aaKnown RBP9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 HAUS3Q68CZ6 603 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 RINT1Q6NUQ1 792 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 RAB11FIP2Q7L804 512 aa9.85□□□□□ -0.83
PPP1R3E-204ENST00000559942 ZNF276Q8N554 614 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms