RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 AGO1Q9UL18 857 aaKnown RBP13.72□□□□□ -0.21
TPM1-220ENST00000559556 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
TPM1-220ENST00000559556 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 A0A1B0GTW7 788 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 SH3BP5O60239 455 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 CAPNS1P04632 268 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 CYBBP04839 570 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 HMBSP08397 361 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 C7P10643 843 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 NCAM1P13591 858 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 MAOBP27338 520 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 OXTRP30559 389 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 COPAP53621 1224 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 YWHAGP61981 247 aaKnown RBP eCLIP13.71□□□□□ -0.21
TPM1-220ENST00000559556 KRT85P78386 507 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 ADAM9Q13443 819 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 TMEM215Q68D42 235 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 PM20D1Q6GTS8 502 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
TPM1-220ENST00000559556 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 TMPRSS6Q8IU80 811 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 DENND1CQ8IV53 801 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 CHCHD4Q8N4Q1 142 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 ZCCHC9Q8N567 271 aaKnown RBP13.71□□□□□ -0.21
TPM1-220ENST00000559556 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 TMEM176AQ96HP8 235 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 CAMK1GQ96NX5 476 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 GPR174Q9BXC1 333 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
TPM1-220ENST00000559556 ATMQ13315 3056 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 SETXQ7Z333 2677 aaKnown RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 ZBED1O96006 694 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 PRKCHP24723 683 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 TKTL1P51854 596 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 TRIP4Q15650 581 aaPredicted RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 TRIP6Q15654 476 aaKnown RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 DCAF12L1Q5VU92 463 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 KRBA2Q6ZNG9 492 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 SIPA1Q96FS4 1042 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
TPM1-220ENST00000559556 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 CLEC4EQ9ULY5 219 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
TPM1-220ENST00000559556 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
TPM1-220ENST00000559556 STX10O60499 249 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 CER1O95813 267 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 FTH1P19P0C7X4 201 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 BCAT1P54687 386 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 SLC8A3P57103 927 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 ZNF445P59923 1031 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 PDE4CQ08493 712 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
TPM1-220ENST00000559556 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 GLRX5Q86SX6 157 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 C1orf216Q8TAB5 229 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 PRCCQ92733 491 aaPredicted RBP13.69□□□□□ -0.22
TPM1-220ENST00000559556 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 ULBP1Q9BZM6 244 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 CIPCQ9C0C6 399 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 HBS1LQ9Y450 684 aaKnown RBP13.69□□□□□ -0.22
TPM1-220ENST00000559556 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
TPM1-220ENST00000559556 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 METTL12A8MUP2 240 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 TULP2O00295 520 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 BCAT2O15382 392 aaPredicted RBP13.68□□□□□ -0.22
TPM1-220ENST00000559556 TIMM44O43615 452 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 LATS1O95835 1130 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 EPHX1P07099 455 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 EPB41P11171 864 aaKnown RBP13.68□□□□□ -0.22
TPM1-220ENST00000559556 ACADMP11310 421 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 HLA-FP30511 346 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 BNC1Q01954 994 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 ADIGQ0VDE8 80 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 BST2Q10589 180 aaKnown RBP13.68□□□□□ -0.22
TPM1-220ENST00000559556 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 MPPE1Q53F39 396 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 PROSER1Q86XN7 944 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 CACUL1Q86Y37 369 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 FMNL3Q8IVF7 1028 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 SPRYD3Q8NCJ5 442 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 WFIKKN2Q8TEU8 576 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 TATDN2Q93075 761 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 EEF2KMTQ96G04 330 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 GOLPH3LQ9H4A5 285 aa13.68□□□□□ -0.22
TPM1-220ENST00000559556 EIF2B4Q9UI10 523 aaKnown RBP13.68□□□□□ -0.22
TPM1-220ENST00000559556 STOML2Q9UJZ1 356 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms