RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 UBXN1Q04323 297 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 RING1Q06587 406 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 SYCP1Q15431 976 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 TAF5Q15542 800 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 GEN1Q17RS7 908 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 ANO6Q4KMQ2 910 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 DCAF6Q58WW2 860 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 EFHC1Q5JVL4 640 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 SYPL2Q5VXT5 272 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 RFWD3Q6PCD5 774 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 TMEM110Q86TL2 294 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 KBTBD6Q86V97 674 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 CCDC117Q8IWD4 279 aaPredicted RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 FAM71AQ8IYT1 594 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 GPR161Q8N6U8 529 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 TMEM35BQ8NCS4 154 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 NEK11Q8NG66 645 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 TMA16Q96EY4 203 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 ACOX2Q99424 681 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 DDX50Q9BQ39 737 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 LHX5Q9H2C1 402 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 EBF1Q9UH73 591 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 TLR6Q9Y2C9 796 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 RAD54BQ9Y620 910 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 PTPRZ1P23471 2315 aaPredicted RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 OTOGLQ3ZCN5 2332 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 THADAQ6YHU6 1953 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 EP300Q09472 2414 aaPredicted RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 GVINP1Q7Z2Y8 2422 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 LGALS16A8MUM7 142 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 IRAK2O43187 625 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 HSF2BPO75031 334 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 RHOBTB1O94844 696 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 IGLV3-27P01718 113 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 ERBB2P04626 1255 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 HOXD9P28356 352 aaPredicted RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 ID4P47928 161 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 SGSHP51688 502 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 RNASE9P60153 205 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 PITX1P78337 314 aaPredicted RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 CDK17Q00537 523 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 NME3Q13232 169 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 NNTQ13423 1086 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 STARD3Q14849 445 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 CCDC6Q16204 474 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 PTPN20Q4JDL3 420 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 ZC3H12AQ5D1E8 599 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 KIAA1324Q6UXG2 1013 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 NOP9Q86U38 636 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 RASSF3Q86WH2 238 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 CHSY1Q86X52 802 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 DEFB106AQ8N104 65 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 WDTC1Q8N5D0 677 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 ATP6V0D2Q8N8Y2 350 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 HJURPQ8NCD3 748 aaPredicted RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 MSANTD4Q8NCY6 345 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 RLN3Q8WXF3 142 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 P2RY11Q96G91 374 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 STK33Q9BYT3 514 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 SLC2A11Q9BYW1 496 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 GANQ9H2C0 597 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 ARRDC1-AS1Q9H2J1 176 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 PARD6AQ9NPB6 346 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 SEMA4GQ9NTN9 838 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 DDIT4Q9NX09 232 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 LIMA1Q9UHB6 759 aaKnown RBP8.51□□□□□ -1.05
SNX1-207ENST00000559401 SLC12A6Q9UHW9 1150 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 CLEC4EQ9ULY5 219 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 SLC27A6Q9Y2P4 619 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 STARD13Q9Y3M8 1113 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 STON1Q9Y6Q2 735 aa8.51□□□□□ -1.05
SNX1-207ENST00000559401 SMTNL1A8MU46 457 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 WASH3PC4AMC7 463 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 GOLGA8SH3BPF8 625 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SYNCRIPO60506 623 aaKnown RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 DAB1O75553 588 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 GLI1P08151 1106 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 MMEP08473 750 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CHRM1P11229 460 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 ATP1A3P13637 1013 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 GABRG2P18507 467 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 ABCB4P21439 1286 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 BCKDHBP21953 392 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SLC6A4P31645 630 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 SOX5P35711 763 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 STAT1P42224 750 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 DHPSP49366 369 aaPredicted RBP8.5□□□□□ -1.05
SNX1-207ENST00000559401 SLC6A3Q01959 620 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CREB5Q02930 508 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 LMNB2Q03252 620 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 CDH18Q13634 790 aa8.5□□□□□ -1.05
SNX1-207ENST00000559401 BYSLQ13895 437 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms