RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 BTN2A3PQ96KV6 586 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SPACA7Q96KW9 195 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PPP1R9BQ96SB3 815 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CPXM1Q96SM3 734 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PHOX2BQ99453 314 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NAA15Q9BXJ9 866 aaKnown RBP4.55□□□□□ -1.68
SNX1-205ENST00000559339 SLC2A11Q9BYW1 496 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 CIPCQ9C0C6 399 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 EPC1Q9H2F5 836 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 FAM204AQ9H8W3 233 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SIX2Q9NPC8 291 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NLRC4Q9NPP4 1024 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNX1-205ENST00000559339 ASNSD1Q9NWL6 643 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 RRN3Q9NYV6 651 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PLK2Q9NYY3 685 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 BCCIPQ9P287 314 aaKnown RBP eCLIP4.55□□□□□ -1.68
SNX1-205ENST00000559339 NCDNQ9UBB6 729 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 EBF1Q9UH73 591 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 STOML2Q9UJZ1 356 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 MMP17Q9ULZ9 603 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 PLA2G4CQ9UP65 541 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NAALADL1Q9UQQ1 740 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 SLC27A6Q9Y2P4 619 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 BOLA1Q9Y3E2 137 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 STARD13Q9Y3M8 1113 aa4.55□□□□□ -1.68
SNX1-205ENST00000559339 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 SYNJ2BP-COX16A0A087WUM0 186 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ANKRD62A6NC57 917 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 KCNU1A8MYU2 1149 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 F5H5T6 163 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 H0Y626 953 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 GFRA2O00451 464 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ACSL4O60488 711 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 FOXD2O60548 495 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 TBL1XO60907 577 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 LILRB5O75023 590 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ZNF217O75362 1048 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 GRAP2O75791 330 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 RHOBTB1O94844 696 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 MOCS3O95396 460 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 TRUB2O95900 331 aaKnown RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 MOCS2O96007 188 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 F9P00740 461 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 IGLV3-27P01718 113 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ERBB2P04626 1255 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 MMEP08473 750 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 PNMA6AP0CW24 399 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 TDGF1P13385 188 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ATP1A3P13637 1013 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 HOXB2P14652 356 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 NTSR1P30989 418 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 NOS2P35228 1153 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 SCNN1AP37088 669 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 NNMTP40261 264 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 MATKP42679 507 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 KIR2DL1P43626 348 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 PXNP49023 591 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 FNTBP49356 437 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 KLK7P49862 253 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 OXCT1P55809 520 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 CDR2Q01850 454 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 SLC6A3Q01959 620 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 STARD3Q14849 445 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 NCAPHQ15003 741 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ELF2Q15723 593 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 GAB4Q2WGN9 574 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 PTPN20Q4JDL3 420 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 RABGAP1LQ5R372 815 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 FAM102AQ5T9C2 384 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 PIK3R6Q5UE93 754 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 TTC39BQ5VTQ0 682 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 TAF3Q5VWG9 929 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 FYB2Q5VWT5 728 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 SYPL2Q5VXT5 272 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 NAA35Q5VZE5 725 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 LAIR1Q6GTX8 287 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ANO7Q6IWH7 933 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 PPP1R2P3Q6NXS1 205 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 PKN3Q6P5Z2 889 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 LRSAM1Q6UWE0 723 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 OLFML1Q6UWY5 402 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ASCL5Q7RTU5 278 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 WDR5BQ86VZ2 330 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 MFN1Q8IWA4 741 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 DHX40Q8IX18 779 aaKnown RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 FAM217AQ8IXS0 508 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 DEFB106AQ8N104 65 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 AHI1Q8N157 1196 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 WDTC1Q8N5D0 677 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 CCDC33Q8N5R6 958 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 ATP6V0D2Q8N8Y2 350 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 HJURPQ8NCD3 748 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 ZNF397Q8NF99 534 aaPredicted RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 ADAM32Q8TC27 787 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 EPS8L1Q8TE68 723 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 DQX1Q8TE96 717 aaKnown RBP4.54□□□□□ -1.68
SNX1-205ENST00000559339 WFIKKN2Q8TEU8 576 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 GAB3Q8WWW8 586 aa4.54□□□□□ -1.68
SNX1-205ENST00000559339 CPA5Q8WXQ8 436 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms