RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 BYSLQ13895 437 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 SPDYCQ5MJ68 293 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 TRAPPC11Q7Z392 1133 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 MIB1Q86YT6 1006 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 CHCHD4Q8N4Q1 142 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 FBXL13Q8NEE6 735 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 GTPBP2Q9BX10 602 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 SNX25Q9H3E2 840 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 RAB20Q9NX57 234 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 EHD2Q9NZN4 543 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 APEX2Q9UBZ4 518 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 ITPR1Q14643 2758 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 MYH10P35580 1976 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 ADAMTS20P59510 1910 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 PLXNB3Q9ULL4 1909 aa11.76□□□□□ -0.53
RABGGTA-204ENST00000558376 E2F8A0AVK6 867 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 TBC1D3BA6NDS4 549 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 COCHO43405 550 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 CAPNS1P04632 268 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 GABRG2P18507 467 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 WASP42768 502 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 BIRC3Q13489 604 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 IQCDQ96DY2 449 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 HAUS4Q9H6D7 363 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 ACP6Q9NPH0 428 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 LZTFL1Q9NQ48 299 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 AIPL1Q9NZN9 384 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 TBC1D14Q9P2M4 693 aa11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 CHORDC1Q9UHD1 332 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-204ENST00000558376 FAM221BA6H8Z2 402 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 P4HA2O15460 535 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 TULP3O75386 442 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 TACC1O75410 805 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CALCAP01258 141 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 SERPINF2P08697 491 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CD59P13987 128 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 YWHAQP27348 245 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 GTF2H1P32780 548 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 GAD2Q05329 585 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 PTK2Q05397 1052 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 GFPT1Q06210 699 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 SURF1Q15526 300 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ZACNQ401N2 412 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 DNTTIP2Q5QJE6 756 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 DDX42Q86XP3 938 aaKnown RBP eCLIP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 NUP93Q8N1F7 819 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 PPM1KQ8N3J5 372 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 SLITRK1Q96PX8 696 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 APC2O95996 2303 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 IGHV1OR15-9A0A0B4J2B8 117 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 A0A1W2PQF6 199 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 RCCD1A6NED2 376 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 F8VZ95 297 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 PMM2O15305 246 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 HOXC11O43248 304 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 HLA-DRAP01903 254 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CCDC175P0C221 793 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 HOXD12P35452 270 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 USP8P40818 1118 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 DPP6P42658 865 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CDK17Q00537 523 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 RPL6Q02878 288 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ASIC2Q16515 512 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 TDRD12Q587J7 1177 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 WDR49Q8IV35 697 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 SLC41A1Q8IVJ1 513 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 HDDC3Q8N4P3 179 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ZNF513Q8N8E2 541 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CEP76Q8TAP6 659 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 FBXO32Q969P5 355 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ERLEC1Q96DZ1 483 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CAMK1GQ96NX5 476 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 KCNK16Q96T55 309 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ACOX2Q99424 681 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CGRRF1Q99675 332 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ARID3AQ99856 593 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 ELOVL4Q9GZR5 314 aa11.74□□□□□ -0.53
RABGGTA-204ENST00000558376 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms