RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 MMP8P22894 467 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 LORP23490 312 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 PPP3CCP48454 512 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 GSDMDP57764 484 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 CDK17Q00537 523 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC6A3Q01959 620 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 AAK1Q2M2I8 961 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 FAM102AQ5T9C2 384 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 ALKBH5Q6P6C2 394 aaKnown RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 BHLHA9Q7RTU4 235 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 BTLAQ7Z6A9 289 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 XYLT1Q86Y38 959 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 PHF13Q86YI8 300 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 MCOLN2Q8IZK6 566 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 OVCA2Q8WZ82 227 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZSWIM3Q96MP5 696 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 PHF7Q9BWX1 381 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC46A2Q9BY10 475 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 NACA2Q9H009 215 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 SMG9Q9H0W8 520 aaKnown RBP12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 DENND4AQ7Z401 1863 aa12.57□□□□□ -0.4
HMGB1P8-201ENST00000558211 TRAV19A0A0A6YYK7 116 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 CAPN9O14815 690 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 MDM4O15151 490 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 TLR5O60602 858 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 GJB6O95452 261 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 CKMP06732 381 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 MBL2P11226 248 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 GZMAP12544 262 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 NCAM1P13591 858 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 HDCP19113 662 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 GABRB2P47870 512 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 SRSF11Q05519 484 aaKnown RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 ASTE1Q2TB18 679 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 EFHC1Q5JVL4 640 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 C10orf120Q5SQS8 335 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 MON1BQ7L1V2 547 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZSCAN18Q8TBC5 510 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 IRGQQ8WZA9 623 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 ACSF2Q96CM8 615 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 EGFL7Q9UHF1 273 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 DOCK8Q8NF50 2099 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
HMGB1P8-201ENST00000558211 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 COCHO43405 550 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 MX2P20592 715 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 RRM1P23921 792 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 CYLC1P35663 651 aaPredicted RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 ATP5C1P36542 298 aaKnown RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 AVPR1AP37288 418 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 YWHAZP63104 245 aaKnown RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 CTBSQ01459 385 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 EFEMP1Q12805 493 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 MTF1Q14872 753 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 OLFML1Q6UWY5 402 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZDHHC17Q8IUH5 632 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 DEFB106AQ8N104 65 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 SCML4Q8N228 414 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 TDRD5Q8NAT2 981 aaKnown RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 METTL5Q9NRN9 209 aaKnown RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 CNOT8Q9UFF9 292 aaKnown RBP12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 SFMBT1Q9UHJ3 866 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 STRIP2Q9ULQ0 834 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 NCANO14594 1321 aa12.55□□□□□ -0.4
HMGB1P8-201ENST00000558211 SYNJ2BP-COX16A0A087WUM0 186 aa12.54□□□□□ -0.4
HMGB1P8-201ENST00000558211 HSF2BPO75031 334 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms