RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 POTEHQ6S545 545 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 GAREM2Q75VX8 874 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 BZW1Q7L1Q6 419 aaKnown RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 GRASPQ7Z6J2 395 aaPredicted RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 ING5Q8WYH8 240 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 SLC39A13Q96H72 371 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 ZNF670Q9BS34 389 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 SLITRK6Q9H5Y7 841 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 CCSER2Q9H7U1 834 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 WDR6Q9NNW5 1121 aaKnown RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 PIGVQ9NUD9 493 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 ARHGAP26Q9UNA1 814 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 DENND4AQ7Z401 1863 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 LRRD1A4D1F6 860 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 KCNU1A8MYU2 1149 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 SLC9A3R1O14745 358 aaPredicted RBP12.86□□□□□ -0.35
TPM1-209ENST00000558072 DDX3YO15523 660 aaKnown RBP12.86□□□□□ -0.35
TPM1-209ENST00000558072 TJP3O95049 919 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 IGLV3-27P01718 113 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 KRT1P04264 644 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 RARAP10276 462 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 SP100P23497 879 aaPredicted RBP12.86□□□□□ -0.35
TPM1-209ENST00000558072 L1CAMP32004 1257 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 CDH6P55285 790 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TFDP3Q5H9I0 405 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TMEM150AQ86TG1 271 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 CMTM8Q8IZV2 173 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.86□□□□□ -0.35
TPM1-209ENST00000558072 FRMD8P1Q9BZ68 369 aaPredicted RBP12.86□□□□□ -0.35
TPM1-209ENST00000558072 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
TPM1-209ENST00000558072 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 DAPK3O43293 454 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 CEP104O60308 925 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 CEBPBP17676 345 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 KCNA5P22460 613 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 KDELR1P24390 212 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 CHKAP35790 457 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 TAS2R40P59535 323 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 ZC3H12AQ5D1E8 599 aaKnown RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 TTC39BQ5VTQ0 682 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 TXNDC8Q6A555 127 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 ARL14EPQ8N8R7 260 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 MAB21L3Q8N8X9 362 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 FAM71BQ8TC56 605 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 HSPH1Q92598 858 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 OTUB2Q96DC9 234 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 FCRL2Q96LA5 508 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 KLF16Q9BXK1 252 aaPredicted RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
TPM1-209ENST00000558072 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM1-209ENST00000558072 TDP1Q9NUW8 608 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 OBP2AQ9NY56 170 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 FAM50BQ9Y247 325 aa12.85□□□□□ -0.35
TPM1-209ENST00000558072 ANAPC1Q9H1A4 1944 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 MOSPD3O75425 235 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 TBX18O95935 607 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 GJC1P36383 396 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 MLLT6P55198 1093 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 PITX1P78337 314 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 TFF2Q03403 129 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 TEAD2Q15562 447 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 RABGAP1LQ5R372 815 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
TPM1-209ENST00000558072 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
TPM1-209ENST00000558072 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms