RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 UHRF1Q96T88 793 aaPredicted RBP22.09■■□□□ 1.13
CASC4-204ENST00000557945 CD320Q9NPF0 282 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 UNC80Q8N2C7 3258 aa22.09■■□□□ 1.13
CASC4-204ENST00000557945 MYO10Q9HD67 2058 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 KIF5AQ12840 1032 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 PIGHQ14442 188 aaPredicted RBP22.08■■□□□ 1.12
CASC4-204ENST00000557945 PDGFRLQ15198 375 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 BRMS1LQ5PSV4 323 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 LACRTQ9GZZ8 138 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 TKTL2Q9H0I9 626 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 EBF3Q9H4W6 596 aa22.08■■□□□ 1.12
CASC4-204ENST00000557945 KCNU1A8MYU2 1149 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 NARSO43776 548 aaKnown RBP22.07■■□□□ 1.12
CASC4-204ENST00000557945 CCDC175P0C221 793 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 ARSAP15289 507 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 NAP1L1P55209 391 aaKnown RBP22.07■■□□□ 1.12
CASC4-204ENST00000557945 MESDQ14696 234 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 IRF7Q92985 503 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 BTN2A3PQ96KV6 586 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 FAM83CQ9BQN1 747 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 XPO7Q9UIA9 1087 aaKnown RBP22.07■■□□□ 1.12
CASC4-204ENST00000557945 SORCS3Q9UPU3 1222 aa22.07■■□□□ 1.12
CASC4-204ENST00000557945 A0A0A6YYK5 440 aaPredicted RBP22.06■■□□□ 1.12
CASC4-204ENST00000557945 ACSL4O60488 711 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 MTA2O94776 668 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 LATS1O95835 1130 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 TNK2Q07912 1038 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 ACAP1Q15027 740 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 TCEAL1Q15170 157 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 EML3Q32P44 896 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 TTC8Q8TAM2 541 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 ATP2A3Q93084 1043 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 AZIN2Q96A70 460 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 OTUB2Q96DC9 234 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 ARHGEF38Q9NXL2 777 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 LCMT1Q9UIC8 334 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 DUSP10Q9Y6W6 482 aa22.06■■□□□ 1.12
CASC4-204ENST00000557945 A0A0U1RQJ8 604 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 GOLGA6L7A0A1B0GV03 622 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 PJA2O43164 708 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 PROSCO94903 275 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 SRFP11831 508 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 SSR1P43307 286 aaKnown RBP22.05■■□□□ 1.12
CASC4-204ENST00000557945 VCPP55072 806 aaKnown RBP22.05■■□□□ 1.12
CASC4-204ENST00000557945 ARL13BQ3SXY8 428 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 ADGRF1Q5T601 910 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 DAB2IPQ5VWQ8 1189 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 ADGRG2Q8IZP9 1017 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 CSGALNACT1Q8TDX6 532 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 ATRIPQ8WXE1 791 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 NCAPGQ9BPX3 1015 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 DDX50Q9BQ39 737 aaKnown RBP22.05■■□□□ 1.12
CASC4-204ENST00000557945 TMPRSS4Q9NRS4 437 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 TRIM10Q9UDY6 481 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 PCSK1NQ9UHG2 260 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 MUTYHQ9UIF7 546 aa22.05■■□□□ 1.12
CASC4-204ENST00000557945 BUB1O43683 1085 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 LRCH4O75427 683 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 PAGE1O75459 146 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 NFATC1O95644 943 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 MIPP30301 263 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 CHKAP35790 457 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 ARHGAP25P42331 645 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 MTA1Q13330 715 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 RAP1GAP2Q684P5 730 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 NADSYN1Q6IA69 706 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 TPGS1Q6ZTW0 290 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 CPA6Q8N4T0 437 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 ARFGAP1Q8N6T3 406 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 CCDC185Q8N715 623 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 NIPA2Q8N8Q9 360 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 SIK2Q9H0K1 926 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 HPS4Q9NQG7 708 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 ANLNQ9NQW6 1124 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 GTSE1Q9NYZ3 720 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 SALL4Q9UJQ4 1053 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 DUSP12Q9UNI6 340 aa22.04■■□□□ 1.12
CASC4-204ENST00000557945 BTNL10A8MVZ5 291 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 TRDMT1O14717 391 aaKnown RBP22.03■■□□□ 1.12
CASC4-204ENST00000557945 PRPSAP2O60256 369 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 TSPAN3O60637 253 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 ADRA1BP35368 520 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 PCK1P35558 622 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 PFKPQ01813 784 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 RUNX3Q13761 415 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 FAM133BQ5BKY9 247 aaKnown RBP22.03■■□□□ 1.12
CASC4-204ENST00000557945 RFWD3Q6PCD5 774 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 SLFN11Q7Z7L1 901 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 CHSY1Q86X52 802 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 TSGA10Q9BZW7 698 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 ECT2Q9H8V3 914 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 SLC2A4RGQ9NR83 387 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 SPHK2Q9NRA0 654 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 STOML2Q9UJZ1 356 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 SNX10Q9Y5X0 201 aa22.03■■□□□ 1.12
CASC4-204ENST00000557945 MACROD2A1Z1Q3 448 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 I6L893 689 aaPredicted RBP22.02■■□□□ 1.12
CASC4-204ENST00000557945 ARNTLO00327 626 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 ADH1CP00326 375 aa22.02■■□□□ 1.12
CASC4-204ENST00000557945 TACR2P21452 398 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms