RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GCOM1H8Y6P7 765 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 MUSKO15146 869 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 CTIFO43310 598 aaKnown RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 ADAM20O43506 726 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 HTATSF1O43719 755 aaKnown RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 CBFA2T3O75081 653 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 TBX10O75333 385 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 CFIP05156 583 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 HLA-DOAP06340 250 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SPATA31D3P0C874 917 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 FCER1AP12319 257 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ZNF28P17035 718 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ATP5F1P24539 256 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 MGAT1P26572 445 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 HTR7P34969 479 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 THPOP40225 353 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 GARSP41250 739 aaKnown RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 CAPZA2P47755 286 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ZNF41P51814 821 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 RCAN1P53805 252 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 UFM1P61960 85 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 TMF1P82094 1093 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SRSF3P84103 164 aaKnown RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 TIAL1Q01085 375 aaKnown RBP eCLIP4.08□□□□□ -1.76
TDP1-217ENST00000557782 SLFN5Q08AF3 891 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 CBFBQ13951 182 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ACAP1Q15027 740 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ACOX1Q15067 660 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 NTRK2Q16620 822 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 AAK1Q2M2I8 961 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 NOMO2Q5JPE7 1267 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 RAB41Q5JT25 222 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 GPRASP1Q5JY77 1395 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ARHGAP40Q5TG30 622 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 RGS7BPQ6MZT1 257 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 EFCAB12Q6NXP0 572 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ZNF449Q6P9G9 518 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SARM1Q6SZW1 724 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SPATA31D4Q6ZUB0 917 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 PIK3AP1Q6ZUJ8 805 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 FAM83AQ86UY5 434 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ERC1Q8IUD2 1116 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SCN4BQ8IWT1 228 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 UNC45BQ8IWX7 931 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SCML4Q8N228 414 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 POGLUT1Q8NBL1 392 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 OR8H1Q8NGG4 311 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 GABPB2Q8TAK5 448 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 TMEM171Q8WVE6 324 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 OVCA2Q8WZ82 227 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 NCSTNQ92542 709 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 BORCS6Q96GS4 357 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ZNF764Q96H86 408 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 ZBTB45Q96K62 511 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 PNKPQ96T60 521 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 HTATIP2Q9BUP3 242 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 HERC2P3Q9BVR0 1158 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 SEZ6LQ9BYH1 1024 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 TTYH1Q9H313 450 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 NDST4Q9H3R1 872 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 NRDE2Q9H7Z3 1164 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 PDE11AQ9HCR9 933 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 MBNL3Q9NUK0 354 aaKnown RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 MARCH4Q9P2E8 410 aaPredicted RBP4.08□□□□□ -1.76
TDP1-217ENST00000557782 STEAP1Q9UHE8 339 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 ADAMTS6Q9UKP5 1117 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 RAB21Q9UL25 225 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 RCE1Q9Y256 329 aa4.08□□□□□ -1.76
TDP1-217ENST00000557782 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 FAM90A22PA8MWA6 464 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 FAM90A12PA8MX19 464 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 A8MXE2 369 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 FAM90A23PA8MXZ1 464 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ADM5C9JUS6 153 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 E7ENX8 843 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 TAF4O00268 1085 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 SYN3O14994 580 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 NKX2-8O15522 239 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 TGFB1I1O43294 461 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PDE8BO95263 885 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 GGPS1O95749 300 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PLATP00750 562 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ATP5BP06576 529 aaKnown RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 RNASE1P07998 156 aaKnown RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 ZNF888P0CJ79 500 aaPredicted RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 TMEM225BP0DP42 221 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 RARGP13631 454 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ACP5P13686 325 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 ALADP13716 330 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 MCM3P25205 808 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 CSF2RBP32927 897 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PBX1P40424 430 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 HNF4AP41235 474 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 MRPL12P52815 198 aaKnown RBP4.07□□□□□ -1.76
TDP1-217ENST00000557782 DGKQP52824 942 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 PPP5CP53041 499 aa4.07□□□□□ -1.76
TDP1-217ENST00000557782 NCKAP1LP55160 1127 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms