RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 NUGGCQ68CJ6 796 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 ERMP1Q7Z2K6 904 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 SCD5Q86SK9 330 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 CPXM2Q8N436 756 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 KDF1Q8NAX2 398 aaPredicted RBP11.93□□□□□ -0.5
LINC00648-204ENST00000557749 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 UCMAQ8WVF2 138 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 SLC2A11Q9BYW1 496 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 FBRSL1Q9HCM7 1045 aaKnown RBP11.93□□□□□ -0.5
LINC00648-204ENST00000557749 DNAJC17Q9NVM6 304 aaKnown RBP11.93□□□□□ -0.5
LINC00648-204ENST00000557749 OSER1Q9NX31 292 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 STARD13Q9Y3M8 1113 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 CEP83Q9Y592 693 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 MYO15AQ9UKN7 3530 aa11.93□□□□□ -0.5
LINC00648-204ENST00000557749 USP34Q70CQ2 3546 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 SLC12A8A0AV02 714 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 TYW5A2RUC4 315 aaKnown RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 GFRA2O00451 464 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 MBD3O95983 291 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 CORO1AP31146 461 aaKnown RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 SCTRP47872 440 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 DGKGP49619 791 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 DAOAP59103 153 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 BPIFB4P59827 614 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 KDSRQ06136 332 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 EIF4HQ15056 248 aaKnown RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 Q6ZVU0 165 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 BEND5Q7L4P6 421 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 RASSF3Q86WH2 238 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 TMEM25Q86YD3 366 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 ZNF513Q8N8E2 541 aaPredicted RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 ANKRD20A12PQ8NF67 263 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 ZC3H10Q96K80 434 aaKnown RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 MED15Q96RN5 788 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 UBE2TQ9NPD8 197 aaPredicted RBP11.92□□□□□ -0.5
LINC00648-204ENST00000557749 USP18Q9UMW8 372 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 DAAM1Q9Y4D1 1078 aa11.92□□□□□ -0.5
LINC00648-204ENST00000557749 IRAK2O43187 625 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 TIMM44O43615 452 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 GREM1O60565 184 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 PENKP01210 267 aaPredicted RBP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 GNA15P30679 374 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 KIR2DL1P43626 348 aaPredicted RBP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 SLC11A2P49281 568 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 SEC13P55735 322 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 RING1Q06587 406 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 TRIP4Q15650 581 aaPredicted RBP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 CSRP2Q16527 193 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 MPPE1Q53F39 396 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 SPDYCQ5MJ68 293 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 MSANTD2Q6P1R3 559 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 CCDC117Q8IWD4 279 aaPredicted RBP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 KIAA2013Q8IYS2 634 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 TXNDC5Q8NBS9 432 aaKnown RBP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 UBA3Q8TBC4 463 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 GLMNQ92990 594 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 SERPINB11Q96P15 392 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 HHIPQ96QV1 700 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00648-204ENST00000557749 SLC27A6Q9Y2P4 619 aa11.91□□□□□ -0.5
LINC00648-204ENST00000557749 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 CAPN9O14815 690 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 SCAMP3O14828 347 aaKnown RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 THAP12O43422 761 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 ZNF217O75362 1048 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 EPN2O95208 641 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 KLF8O95600 359 aaPredicted RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 LTFP02788 710 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 LCP1P13796 627 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 NTSR1P30989 418 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 SLC6A11P48066 632 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 PGFP49763 221 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 STARD3Q14849 445 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 MPP7Q5T2T1 576 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 PKN3Q6P5Z2 889 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 TPGS1Q6ZTW0 290 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 C12orf40Q86WS4 652 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 ARHGEF19Q8IW93 802 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 CHPFQ8IZ52 775 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 ALLCQ8N6M5 410 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 NAT16Q8N8M0 369 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
LINC00648-204ENST00000557749 IL17RCQ8NAC3 791 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 NETO1Q8TDF5 533 aa11.9□□□□□ -0.5
LINC00648-204ENST00000557749 WFIKKN2Q8TEU8 576 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms