RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TMCO2Q7Z6W1 182 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-233ENST00000557529 UNC45BQ8IWX7 931 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 GLIS1Q8NBF1 620 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-233ENST00000557529 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 ZIM3Q96PE6 472 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 HAPLN3Q96S86 360 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 MAGEB5Q9BZ81 275 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 ARHGEF38Q9NXL2 777 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 GMIPQ9P107 970 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 MAFFQ9ULX9 164 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 PCDHB12Q9Y5F1 795 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 RAD54BQ9Y620 910 aa12.92□□□□□ -0.34
SHMT2-233ENST00000557529 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 SLC38A8A6NNN8 435 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 C2CD2LO14523 706 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 TP73O15350 636 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ADAM12O43184 909 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ABLIM3O94929 683 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ZSCAN5DPP0CG00 497 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ETS1P14921 441 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 RPL22P35268 128 aaKnown RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 GGCXP38435 758 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 GDF10P55107 478 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 FAM193AP78312 1265 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 GBE1Q04446 702 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PAFAH1B3Q15102 231 aaKnown RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PDK1Q15118 436 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 SLC45A4Q5BKX6 768 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PSRC1Q6PGN9 363 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 TRMT10CQ7L0Y3 403 aaKnown RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 C16orf59Q7L2K0 433 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 HOOK3Q86VS8 718 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 FIBCD1Q8N539 461 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ZNF461Q8TAF7 563 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 CASP10Q92851 521 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 CDK5RAP1Q96SZ6 601 aaKnown RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 TTLL2Q9BWV7 592 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 CRISPLD1Q9H336 500 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PABPC3Q9H361 631 aaKnown RBP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 ANLNQ9NQW6 1124 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PAK5Q9P286 719 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 OR12D3Q9UGF7 316 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 SSX2IPQ9Y2D8 614 aa12.91□□□□□ -0.34
SHMT2-233ENST00000557529 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 AGPSO00116 658 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 DCLK1O15075 740 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 NCAM2O15394 837 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 KCNN4O15554 427 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 SOAT2O75908 522 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 GJB5O95377 273 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 RPL17P18621 184 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 OAS2P29728 719 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 PGFP49763 221 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 EIF3BP55884 814 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 TAF10Q12962 218 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 RAB33AQ14088 237 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 PRUNE1Q86TP1 453 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 CCDC25Q86WR0 208 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 VPS52Q8N1B4 723 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 PDZD8Q8NEN9 1154 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 GPR152Q8TDT2 470 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 OVCA2Q8WZ82 227 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 BADQ92934 168 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 OLFM3Q96PB7 478 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 SH3GL2Q99962 352 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 ZBED2Q9BTP6 218 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 ADAM7Q9H2U9 754 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 C10orf88Q9H8K7 445 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 USP29Q9HBJ7 922 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHMT2-233ENST00000557529 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 DTLQ9NZJ0 730 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 TLR6Q9Y2C9 796 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
SHMT2-233ENST00000557529 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FAM72CH0Y354 149 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 H3BQF6 201 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 I6L893 689 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms