RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ENPP2Q13822 863 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 DUOXA1Q1HG43 343 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 FUT11Q495W5 492 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 MPPE1Q53F39 396 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 MSANTD2Q6P1R3 559 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 TRIM59Q8IWR1 403 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 LMO3Q8TAP4 145 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 CEP76Q8TAP6 659 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 SLC35F5Q8WV83 523 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 IRGQQ8WZA9 623 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 GOLGA1Q92805 767 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 KAT5Q92993 513 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 HSPA12BQ96MM6 686 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 SLC6A17Q9H1V8 727 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 CD93Q9NPY3 652 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 MSI1O43347 362 aaKnown RBP14.78□□□□□ -0.04
SNX6-210ENST00000557341 SYNCRIPO60506 623 aaKnown RBP14.78□□□□□ -0.04
SNX6-210ENST00000557341 NDUFS2O75306 463 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 AFPP02771 609 aaKnown RBP14.78□□□□□ -0.04
SNX6-210ENST00000557341 MAPK8P45983 427 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 MARSP56192 900 aaKnown RBP14.78□□□□□ -0.04
SNX6-210ENST00000557341 ARID5AQ03989 594 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 KCNH2Q12809 1159 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 ZNF234Q14588 700 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 CNGA2Q16280 664 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 UAP1L1Q3KQV9 507 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 SH3PXD2AQ5TCZ1 1133 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 PMF1Q6P1K2 205 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 RRAGAQ7L523 313 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 ARHGEF19Q8IW93 802 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 DEFB119Q8N690 84 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 PRDM16Q9HAZ2 1276 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 STOML2Q9UJZ1 356 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 CLEC4EQ9ULY5 219 aa14.78□□□□□ -0.04
SNX6-210ENST00000557341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX6-210ENST00000557341 PCNX2A6NKB5 2137 aa14.77□□□□□ -0.04
SNX6-210ENST00000557341 WDFY3Q8IZQ1 3526 aa14.77□□□□□ -0.04
SNX6-210ENST00000557341 RNF225M0QZC1 329 aaPredicted RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 PIK3R2O00459 728 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 GADD45BO75293 160 aaPredicted RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 FBXO21O94952 628 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 LTFP02788 710 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 SERPINF2P08697 491 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 PRKCHP24723 683 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 ATXN3P54252 364 aaPredicted RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 STX17P56962 302 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 SHC2P98077 582 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 ADGRF1Q5T601 910 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 SERPINA13PQ6UXR4 307 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 METTL3Q86U44 580 aaKnown RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 SLC41A1Q8IVJ1 513 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 WFIKKN2Q8TEU8 576 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 HSFY1Q96LI6 401 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 ZSWIM1Q9BR11 485 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 USP36Q9P275 1121 aaKnown RBP14.77□□□□□ -0.05
SNX6-210ENST00000557341 SLC6A14Q9UN76 642 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 PLXNA2O75051 1894 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 NUMA1Q14980 2115 aa14.77□□□□□ -0.05
SNX6-210ENST00000557341 GIPC1O14908 333 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 TIMM44O43615 452 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 TSPAN3O60637 253 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 FGFR1OPO95684 399 aaKnown RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 IGLV3-27P01718 113 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 NCAM1P13591 858 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 CEACAM1P13688 526 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 CD6P30203 668 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 HLA-FP30511 346 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 GFPT1Q06210 699 aaPredicted RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 RING1Q06587 406 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 SYCP2LQ5T4T6 812 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 TMEM215Q68D42 235 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 UNC45BQ8IWX7 931 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 RGL4Q8IZJ4 473 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 AHI1Q8N157 1196 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 EHBP1Q8NDI1 1231 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 CLEC4CQ8WTT0 213 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 SORCS1Q8WY21 1168 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 PRCCQ92733 491 aaPredicted RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 FOXJ1Q92949 421 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 GTPBP2Q9BX10 602 aaKnown RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 IRX2Q9BZI1 471 aaPredicted RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 MKRN2Q9H000 416 aaKnown RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 INTS2Q9H0H0 1204 aaKnown RBP14.76□□□□□ -0.05
SNX6-210ENST00000557341 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 SUSD2Q9UGT4 822 aa14.76□□□□□ -0.05
SNX6-210ENST00000557341 IRAK2O43187 625 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 SART1O43290 800 aaKnown RBP14.75□□□□□ -0.05
SNX6-210ENST00000557341 GABBR2O75899 941 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 CALCAP01258 141 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 EPHX1P07099 455 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 KRT5P13647 590 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 SLC11A2P49281 568 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 CACUL1Q86Y37 369 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 TMPRSS6Q8IU80 811 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms