RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 QKIQ96PU8 341 aaKnown RBP eCLIP19.91■□□□□ 0.786e-7■■□□□ 14.2
FOXN3-214ENST00000557258 PPP1R10Q96QC0 940 aaKnown RBP19.91■□□□□ 0.78
FOXN3-214ENST00000557258 NMRK2Q9NPI5 230 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 PCMTD2Q9NV79 361 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 RNF103O00237 685 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 XPOTO43592 962 aaKnown RBP19.91■□□□□ 0.78
FOXN3-214ENST00000557258 AXLP30530 894 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 SLC8A3P57103 927 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 DEUP1Q05D60 604 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 EFHC1Q5JVL4 640 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 SLC26A11Q86WA9 606 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 P2RY11Q96G91 374 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 LRRC37BQ96QE4 947 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 SRPK1Q96SB4 655 aaKnown RBP19.91■□□□□ 0.78
FOXN3-214ENST00000557258 MANSC1Q9H8J5 431 aa19.91■□□□□ 0.78
FOXN3-214ENST00000557258 FYNP06241 537 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 GSTA1P08263 222 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 NCAM1P13591 858 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 NQO1P15559 274 aaKnown RBP19.9■□□□□ 0.78
FOXN3-214ENST00000557258 PSMB4P28070 264 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 COLGALT1Q8NBJ5 622 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 PRR11Q96HE9 360 aaPredicted RBP19.9■□□□□ 0.78
FOXN3-214ENST00000557258 SIGLEC10Q96LC7 697 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 HSFY1Q96LI6 401 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 HNRNPABQ99729 332 aaKnown RBP19.9■□□□□ 0.78
FOXN3-214ENST00000557258 AGO3Q9H9G7 860 aaKnown RBP19.9■□□□□ 0.78
FOXN3-214ENST00000557258 FAM105AQ9NUU6 356 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 INPP5FQ9Y2H2 1132 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 RALGAPA2Q2PPJ7 1873 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 CFAP69A5D8W1 941 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 APOEP02649 317 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 ACADSBP45954 432 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 XKR4Q5GH76 650 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 RNF43Q68DV7 783 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 DSTYKQ6XUX3 929 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 MTDHQ86UE4 582 aaKnown RBP19.9■□□□□ 0.78
FOXN3-214ENST00000557258 STKLD1Q8NE28 680 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 ARMC2Q8NEN0 867 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 C10orf82Q8WW14 230 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 PRDM12Q9H4Q4 367 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 L3MBTL1Q9Y468 752 aa19.9■□□□□ 0.78
FOXN3-214ENST00000557258 ATP6V1G2O95670 118 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 FAM200BP0CF97 657 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 FKBP1BP68106 108 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 APOPT1Q96IL0 206 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 ZIC5Q96T25 663 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 SMOQ99835 787 aa19.89■□□□□ 0.78
FOXN3-214ENST00000557258 IQCGQ9H095 443 aaKnown RBP19.89■□□□□ 0.78
FOXN3-214ENST00000557258 ARL5CA6NH57 179 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 COPEO14579 308 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 CHRNA1P02708 482 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 USP6NLQ92738 828 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 ATXN7L3BQ96GX2 97 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 SYT15Q9BQS2 421 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 PHACTR1Q9C0D0 580 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 FAM124BQ9H5Z6 455 aaPredicted RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 MARCOQ9UEW3 520 aaPredicted RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 CCDC78A2IDD5 438 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 GCATO75600 419 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 WARSP23381 471 aaKnown RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 MGAT1P26572 445 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 MRPS6P82932 125 aaKnown RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 SETDB1Q15047 1291 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 RASA2Q15283 850 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 TAF1BQ53T94 588 aaPredicted RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 SH2D5Q6ZV89 423 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 STRADAQ7RTN6 431 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 RASAL3Q86YV0 1011 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 ZMIZ2Q8NF64 920 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 NOD2Q9HC29 1040 aa19.89■□□□□ 0.77
FOXN3-214ENST00000557258 FBXO6Q9NRD1 293 aaPredicted RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.89■□□□□ 0.77
FOXN3-214ENST00000557258 HMX2A2RU54 273 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 SMAPO00193 183 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 EEF2KO00418 725 aaKnown RBP19.88■□□□□ 0.77
FOXN3-214ENST00000557258 MGRN1O60291 552 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 KITP10721 976 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 YY1P25490 414 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 BRCC3P46736 316 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 TTC39BQ5VTQ0 682 aaPredicted RBP19.88■□□□□ 0.77
FOXN3-214ENST00000557258 ZCCHC23Q6ZST2 131 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 NLRP9Q7RTR0 991 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 TOP6BLQ8N6T0 577 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 GRAMD1AQ96CP6 724 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 EBNA1BP2Q99848 306 aaKnown RBP19.88■□□□□ 0.77
FOXN3-214ENST00000557258 APOL2Q9BQE5 337 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 PPCSQ9HAB8 311 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 DDIT4Q9NX09 232 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 KANSL3Q9P2N6 904 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 FETUBQ9UGM5 382 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 USH1CQ9Y6N9 552 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 M0QZ92 97 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 THP07101 528 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 RGS2P41220 211 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 ABCG1P45844 678 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 NEK3P51956 506 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 SLC18A1P54219 525 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 CES4AQ5XG92 561 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 OLFM3Q96PB7 478 aa19.88■□□□□ 0.77
FOXN3-214ENST00000557258 NPY6RQ99463 290 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms