RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 STXBP5LQ9Y2K9 1186 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 KDM3BQ7LBC6 1761 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 DLC1Q96QB1 1528 aa4.11□□□□□ -1.75
FOXN3-213ENST00000556916 SPEF2Q9C093 1822 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KIF13BQ9NQT8 1826 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PNMA6EA0A0J9YXQ4 647 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 WIPF3A6NGB9 483 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 MANSC4A6NHS7 340 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 ORC4O43929 436 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 IPO7O95373 1038 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 YEATS4O95619 227 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 IFIT2P09913 472 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 GPD1P21695 349 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PAX7P23759 505 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PRPHP41219 470 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 CLNS1AP54105 237 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 RAB1AP62820 205 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 GNGT1P63211 74 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 CEBPZQ03701 1054 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 CKAP4Q07065 602 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 ACTN3Q08043 901 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 STK3Q13188 491 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 GTF2H3Q13889 308 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KARSQ15046 597 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 STK38Q15208 465 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 SNCBQ16143 134 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PDCD2Q16342 344 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 DPCR1Q3MIW9 517 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 CCDC40Q4G0X9 1142 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 FILIP1LQ4L180 1135 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF569Q5MCW4 686 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TSTD2Q5T7W7 516 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KIAA0895LQ68EN5 471 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 SWSAP1Q6NVH7 229 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TAPT1Q6NXT6 567 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TSHZ1Q6ZSZ6 1077 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TMPRSS9Q7Z410 1059 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 C1QL2Q7Z5L3 287 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 AMIGO2Q86SJ2 522 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 DENND1CQ8IV53 801 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 MAGEB6Q8N7X4 407 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 MAB21L3Q8N8X9 362 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TC2NQ8N9U0 490 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KCNG4Q8TDN1 519 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 DDB2Q92466 427 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TFAP2BQ92481 460 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF778Q96MU6 729 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PANX2Q96RD6 677 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TRIB1Q96RU8 372 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 NAPGQ99747 312 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TEX13AQ9BXU3 409 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 B3GNT5Q9BYG0 378 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 VCPKMTQ9H867 229 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 ATP6V0A4Q9HBG4 840 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 GPR35Q9HC97 309 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 STK26Q9P289 416 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 CPSF2Q9P2I0 782 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 HOOK1Q9UJC3 728 aaKnown RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 TUBE1Q9UJT0 475 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PCDHA7Q9UN72 937 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 KDM6AO15550 1401 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 NPHP4O75161 1426 aaPredicted RBP4.1□□□□□ -1.75
FOXN3-213ENST00000556916 PTPRMP28827 1452 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 AGLP35573 1532 aa4.1□□□□□ -1.75
FOXN3-213ENST00000556916 MYH3P11055 1940 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 A0A1B0GVL5 298 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 A0A1W2PS29 197 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 GOLGA6BA6NDN3 693 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 H3BML4 177 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 M0QYG6 137 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 MYO1FO00160 1098 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 POLRMTO00411 1230 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 NDUFAB1O14561 156 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 CTNND1O60716 968 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 RTN2O75298 545 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SURF6O75683 361 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 RASSF9O75901 435 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 DNAJB5O75953 348 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ARIH2O95376 493 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 HMGB1P09429 215 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 FTH1P19P0C7X4 201 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 UBTFL1P0CB47 393 aaPredicted RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 RARBP10826 455 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 EPB41P11171 864 aaKnown RBP4.09□□□□□ -1.75
FOXN3-213ENST00000556916 KCNA2P16389 499 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 GCKP35557 465 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SOX8P57073 446 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ZNF844Q08AG5 666 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 MTX1Q13505 466 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 HSP90AB2PQ58FF8 381 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 KHDC1LQ5JSQ8 128 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ALS2CLQ60I27 953 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 KAZNQ674X7 775 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 SPECC1LQ69YQ0 1117 aa4.09□□□□□ -1.75
FOXN3-213ENST00000556916 ISM2Q6H9L7 571 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms