RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 CT47A1Q5JQC4 288 aaPredicted RBP18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 TRIM65Q6PJ69 517 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 TMEFF1Q8IYR6 380 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 ZNF606Q8WXB4 792 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 SERPINB11Q96P15 392 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 NUSAP1Q9BXS6 441 aaKnown RBP18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 MIS12Q9H081 205 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 CLSTN2Q9H4D0 955 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 APEX2Q9UBZ4 518 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 PLA2G4CQ9UP65 541 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 MYOFQ9NZM1 2061 aa18.54■□□□□ 0.56
EFCAB11-211ENST00000556609 TYW5A2RUC4 315 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 GABBR2O75899 941 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 NCAM1P13591 858 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 NDUFV2P19404 249 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 GNA15P30679 374 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 MTIF2P46199 727 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 KIAA1211LQ6NV74 962 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 TMEM110Q86TL2 294 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 CCDC117Q8IWD4 279 aaPredicted RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 FOXJ1Q92949 421 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 MRGPRX1Q96LB2 322 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 LSM14BQ9BX40 385 aaKnown RBP18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 SLC4A5Q9BY07 1137 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 CIPCQ9C0C6 399 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 SMOC1Q9H4F8 434 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 TMEM9BQ9NQ34 198 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 TLR6Q9Y2C9 796 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 MYO16Q9Y6X6 1858 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 KIAA1549LQ6ZVL6 1849 aa18.53■□□□□ 0.56
EFCAB11-211ENST00000556609 CAPN9O14815 690 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 MSI1O43347 362 aaKnown RBP18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 THAP12O43422 761 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 NDUFS2O75306 463 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 ADRB1P08588 477 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 HOXD9P28356 352 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 OXTRP30559 389 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 SYCP2LQ5T4T6 812 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 PEAR1Q5VY43 1037 aaPredicted RBP18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 TCEAL6Q6IPX3 200 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 TCEAL3Q969E4 200 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 FAM149B1Q96BN6 582 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 P2RY11Q96G91 374 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 NOX5Q96PH1 765 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 PRDM16Q9HAZ2 1276 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 RXFP3Q9NSD7 469 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 PILRBQ9UKJ0 227 aa18.52■□□□□ 0.56
EFCAB11-211ENST00000556609 IGHV1OR15-9A0A0B4J2B8 117 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 LNP1A1A4G5 178 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 PIK3R2O00459 728 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 ACSL4O60488 711 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 TSPAN3O60637 253 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 ATP5BP06576 529 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 USP8P40818 1118 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 IL12RB1P42701 662 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 PTGER3P43115 390 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 PTK2Q05397 1052 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 MAN2A1Q16706 1144 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 DUOXA1Q1HG43 343 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 TRIM61Q5EBN2 209 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 SLC23A3Q6PIS1 610 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 KIAA1324Q6UXG2 1013 aaKnown RBP18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 SERPINA13PQ6UXR4 307 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 AHI1Q8N157 1196 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 FBRSQ9HAH7 460 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 POPDC2Q9HBU9 364 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 RAD54BQ9Y620 910 aa18.51■□□□□ 0.55
EFCAB11-211ENST00000556609 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 WASH3PC4AMC7 463 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 GLI1P08151 1106 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 SLC9A1P19634 815 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 PON1P27169 355 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 CD6P30203 668 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 BPIFB4P59827 614 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 YWHAZP63104 245 aaKnown RBP18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 IRX4P78413 519 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 ZNF33AQ06730 810 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 MTA1Q13330 715 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 ZNF234Q14588 700 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 FUT11Q495W5 492 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 WDR45BQ5MNZ6 344 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 PIK3R6Q5UE93 754 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 IRF2BP1Q8IU81 584 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 FRMD1Q8N878 549 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 HJURPQ8NCD3 748 aaPredicted RBP18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 DQX1Q8TE96 717 aaKnown RBP18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 CLEC4CQ8WTT0 213 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 SHC3Q92529 594 aa18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 PRCCQ92733 491 aaPredicted RBP18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 ZNF419Q96HQ0 510 aaPredicted RBP18.5■□□□□ 0.55
EFCAB11-211ENST00000556609 ITM2CQ9NQX7 267 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms