RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 C7P10643 843 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 ACSL1P33121 698 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 PIK3CAP42336 1068 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 GRIA4P48058 902 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-221ENST00000556571 PTPRNQ16849 979 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 TMEM215Q68D42 235 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 MARCH9Q86YJ5 346 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 SORCS1Q8WY21 1168 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 IGSF8Q969P0 613 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
ACTN1-221ENST00000556571 IMPG2Q9BZV3 1241 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 C6orf106Q9H6K1 298 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-221ENST00000556571 TM9SF3Q9HD45 589 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 MARCH2Q9P0N8 246 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 PLA2G4CQ9UP65 541 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 PTPRBP23467 1997 aa12.45□□□□□ -0.42
ACTN1-221ENST00000556571 MYH10P35580 1976 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 FAM149AA5PLN7 773 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 PDXKO00764 312 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 DFNA5O60443 496 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 YEATS4O95619 227 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 HLA-EP13747 358 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 CD27P26842 260 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 CCT8P50990 548 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 PDE4CQ08493 712 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 CUL4BQ13620 913 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 INAVAQ3KP66 663 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 MPPE1Q53F39 396 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 RSRC2Q7L4I2 434 aaKnown RBP12.44□□□□□ -0.42
ACTN1-221ENST00000556571 TMPRSS12Q86WS5 348 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 PLD4Q96BZ4 506 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 UBXN6Q9BZV1 441 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 BTBD1Q9H0C5 482 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 FBRSQ9HAH7 460 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 SLCO1B1Q9Y6L6 691 aa12.44□□□□□ -0.42
ACTN1-221ENST00000556571 NUMA1Q14980 2115 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-221ENST00000556571 SLC12A8A0AV02 714 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 H0Y8X5 98 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 KCNK3O14649 394 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 TSPAN3O60637 253 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 SEMA4FO95754 770 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 DNTTP04053 509 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 NR3C1P04150 777 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 CD58P19256 250 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 AFMP43652 599 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 BCAT1P54687 386 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 STK4Q13043 487 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 FNDC3BQ53EP0 1204 aaKnown RBP12.43□□□□□ -0.42
ACTN1-221ENST00000556571 CCDC157Q569K6 752 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 PPP1R26Q5T8A7 1209 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-221ENST00000556571 WFIKKN2Q8TEU8 576 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 SNX21Q969T3 373 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 BIRC7Q96CA5 298 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 UBL7Q96S82 380 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-221ENST00000556571 NIF3L1Q9GZT8 377 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 TMEM245Q9H330 911 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 KCTD10Q9H3F6 313 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 SGK2Q9HBY8 427 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 FAM13BQ9NYF5 915 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 FTSJ1Q9UET6 329 aa12.43□□□□□ -0.42
ACTN1-221ENST00000556571 TK2O00142 265 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 MAPK13O15264 365 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 PAPSS1O43252 624 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 FSBPO95073 299 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 CDK4P11802 303 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 HLA-FP30511 346 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 CTSKP43235 329 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 ABCG1P45844 678 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 VAMP7P51809 220 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 ZNF445P59923 1031 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 YWHAGP61981 247 aaKnown RBP eCLIP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 RPS14P62263 151 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 TRIP4Q15650 581 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 C1orf220Q5T0J3 134 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 CEP135Q66GS9 1140 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 DHRS13Q6UX07 377 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 ADAT2Q7Z6V5 191 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 KIAA0895Q8NCT3 520 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 GOLGA1Q92805 767 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 TMA16Q96EY4 203 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 HEXIM2Q96MH2 286 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 ARID3AQ99856 593 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 APOBEC3GQ9HC16 384 aaKnown RBP12.42□□□□□ -0.42
ACTN1-221ENST00000556571 PRSS16Q9NQE7 514 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
ACTN1-221ENST00000556571 SUN2Q9UH99 717 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms