RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 EIF4EBP2Q13542 120 aaPredicted RBP14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 TDGQ13569 410 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 PPP2R5DQ14738 602 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ARL13BQ3SXY8 428 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ARHGAP29Q52LW3 1261 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 RNF135Q8IUD6 432 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 SIK2Q9H0K1 926 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 TBC1D14Q9P2M4 693 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 SALL4Q9UJQ4 1053 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 PPP2R2CQ9Y2T4 447 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 GREB1Q4ZG55 1949 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 A0A0A6YYK5 440 aaPredicted RBP14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 GOLGA6L7A0A1B0GV03 622 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 KCNU1A8MYU2 1149 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 TRDMT1O14717 391 aaKnown RBP14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 PJA2O43164 708 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 NARSO43776 548 aaKnown RBP14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 PRPSAP2O60256 369 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 LRCH4O75427 683 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 PROSCO94903 275 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ENDOD1O94919 500 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ARSAP15289 507 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 GJC1P36383 396 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 BRMS1LQ5PSV4 323 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 Q6ZNB5 142 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 TPGS1Q6ZTW0 290 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 BNIPLQ7Z465 357 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 CHSY1Q86X52 802 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 CPNE8Q86YQ8 564 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 CCDC185Q8N715 623 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 BHMTQ93088 406 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 BTN2A3PQ96KV6 586 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 TSGA10Q9BZW7 698 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ANLNQ9NQW6 1124 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 GUCA1BQ9UMX6 200 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 ZNF510Q9Y2H8 683 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 DENND4AQ7Z401 1863 aa14.57□□□□□ -0.08
VIPAS39-208ENST00000556412 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 CHADO15335 359 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 KRT86O43790 486 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 ACSL4O60488 711 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 BUB1BO60566 1050 aaPredicted RBP14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 TSPAN3O60637 253 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 PAGE1O75459 146 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 MTA2O94776 668 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 TNNT1P13805 278 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 MIPP30301 263 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 PDGFRLQ15198 375 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 RAP1GAP2Q684P5 730 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 RFWD3Q6PCD5 774 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 ARFGAP1Q8N6T3 406 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 UHRF1Q96T88 793 aaPredicted RBP14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 ZWILCHQ9H900 591 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 ARHGEF38Q9NXL2 777 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 LCMT1Q9UIC8 334 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 HYOU1Q9Y4L1 999 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 SNX10Q9Y5X0 201 aa14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
VIPAS39-208ENST00000556412 MOCS3O95396 460 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 TCF4P15884 667 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ARHGAP25P42331 645 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ACAP1Q15027 740 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 TCEAL1Q15170 157 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ANO4Q32M45 955 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 EML3Q32P44 896 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ADGRF1Q5T601 910 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 NADSYN1Q6IA69 706 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 SLFN11Q7Z7L1 901 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 DAAM2Q86T65 1068 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 NIPA2Q8N8Q9 360 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 CSGALNACT1Q8TDX6 532 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 IRF7Q92985 503 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ATP2A3Q93084 1043 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 FAM83CQ9BQN1 747 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 TMEM51Q9NW97 253 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 TRMT1Q9NXH9 659 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 GTSE1Q9NYZ3 720 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 PYCARDQ9ULZ3 195 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 USP18Q9UMW8 372 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 DOCK6Q96HP0 2047 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 BTNL10A8MVZ5 291 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 I6L893 689 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 SPOPO43791 374 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 NFATC1O95644 943 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ADRA1BP35368 520 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 CHKAP35790 457 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 IFI16Q16666 785 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 SMTNL2Q2TAL5 461 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 MS4A13Q5J8X5 152 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 EFHC2Q5JST6 749 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 KCNT1Q5JUK3 1230 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 ZFYVE27Q5T4F4 411 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 CPA6Q8N4T0 437 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 TPCN2Q8NHX9 752 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 OTUB2Q96DC9 234 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 PEBP4Q96S96 227 aa14.55□□□□□ -0.08
VIPAS39-208ENST00000556412 DDX50Q9BQ39 737 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms