RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 C2CD6Q53TS8 623 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 OR6B2Q6IFH4 312 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 FSTL4Q6MZW2 842 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 SARM1Q6SZW1 724 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 PHF13Q86YI8 300 aaPredicted RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 ETFBKMTQ8IXQ9 262 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 DEFB106AQ8N104 65 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 DTWD2Q8NBA8 298 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 SYN2Q92777 582 aaPredicted RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 AZIN2Q96A70 460 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 PLD4Q96BZ4 506 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 LMAN1LQ9HAT1 526 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 SPHK2Q9NRA0 654 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 LSM7Q9UK45 103 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 NDRG2Q9UN36 371 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 ZNF510Q9Y2H8 683 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 MYO16Q9Y6X6 1858 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 FAM187AA6NFU0 413 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 DAB1O75553 588 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 GRAP2O75791 330 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TRUB2O95900 331 aaKnown RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 ADH1CP00326 375 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 CCDC172P0C7W6 258 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ADH5P11766 374 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 SLC6A11P48066 632 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TBX4P57082 545 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ZBED6P86452 979 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 AMPD2Q01433 879 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 MESP2Q0VG99 397 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 PON2Q15165 354 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ASIC2Q16515 512 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 MSS51Q4VC12 460 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 SFMBT2Q5VUG0 894 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 OTUD1Q5VV17 481 aaPredicted RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 HGSNATQ68CP4 663 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TRNP1Q6NT89 227 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 MMS22LQ6ZRQ5 1243 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TOGARAM2Q6ZUX3 1019 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ARCQ7LC44 396 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ZNF571Q7Z3V5 609 aaPredicted RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TAC4Q86UU9 113 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 C12orf40Q86WS4 652 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 DENND1CQ8IV53 801 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 PHTF2Q8N3S3 785 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 CPXM2Q8N436 756 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ADAM32Q8TC27 787 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 IQCDQ96DY2 449 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 FCRL2Q96LA5 508 aaPredicted RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 TRIM62Q9BVG3 475 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 HAUS4Q9H6D7 363 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 TMEM59LQ9UK28 342 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 FBXO10Q9UK96 956 aa10.05□□□□□ -0.8
SRP54-210ENST00000556380 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
SRP54-210ENST00000556380 MYOFQ9NZM1 2061 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 TCRBV5S1A1TA0A578 114 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 FAM170AA1A519 330 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 KCNU1A8MYU2 1149 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.82e-12■■■□□ 16.3
SRP54-210ENST00000556380 NCAM2O15394 837 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 IRAK2O43187 625 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 CBFA2T2O43439 604 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 LATS1O95835 1130 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 EGFP01133 1207 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 PENKP01210 267 aaPredicted RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 CISD3P0C7P0 127 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 SKILP12757 684 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 HNRNPH3P31942 346 aaKnown RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 NOS2P35228 1153 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 EIF2DP41214 584 aaKnown RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 MATKP42679 507 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 MAGEA9P43362 315 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 HARS2P49590 506 aaKnown RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 GSCP56915 257 aaPredicted RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 CDK17Q00537 523 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 GAD2Q05329 585 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 DCAF6Q58WW2 860 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 DGKKQ5KSL6 1271 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 FYB2Q5VWT5 728 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 NADSYN1Q6IA69 706 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 ACAD10Q6JQN1 1059 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 MON1BQ7L1V2 547 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 SYNPOQ8N3V7 929 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 CD101Q93033 1021 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms