RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NECTIN4Q96NY8 510 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF670Q9BS34 389 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 FRMD8P1Q9BZ68 369 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 ADAM7Q9H2U9 754 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 TTYH1Q9H313 450 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CATSPERBQ9H7T0 1116 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 KIF9Q9HAQ2 790 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 HCFC1R1Q9NWW0 138 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 CLDND1Q9NY35 253 aa9.55□□□□□ -0.88
ACTN1-218ENST00000556343 ZFP37Q9Y6Q3 630 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-218ENST00000556343 PTPRDP23468 1912 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 LAMA2P24043 3122 aaKnown RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CTAGE15A4D2H0 777 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 C2orf78A6NCI8 922 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CCDC188H7C350 402 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 MSI1O43347 362 aaKnown RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CREB3O43889 395 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ACSL4O60488 711 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 SRGAP2O75044 1071 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PAGE1O75459 146 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 TADA3O75528 432 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF189O75820 626 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 OLFM2O95897 454 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 MOCS2O96007 188 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 FGGP02679 453 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CTAGE8P0CG41 777 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 WEE1P30291 646 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 GTF2F1P35269 517 aaKnown RBP eCLIP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 MLLT6P55198 1093 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 TPI1P60174 286 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PITX1P78337 314 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 NRG1Q02297 640 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ATP13A4Q4VNC1 1196 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PRSS36Q5K4E3 855 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 RABGAP1LQ5R372 815 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 OTUD1Q5VV17 481 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 DAB2IPQ5VWQ8 1189 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 TMEM150AQ86TG1 271 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CTAGE6Q86UF2 777 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CPNE8Q86YQ8 564 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 SLC13A5Q86YT5 568 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CREG2Q8IUH2 290 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CCDC117Q8IWD4 279 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CTAGE4Q8IX94 777 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CMTM8Q8IZV2 173 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 KIAA1958Q8N8K9 716 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 RAPGEF5Q92565 580 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ALG3Q92685 438 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 E2F7Q96AV8 911 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PABPC5Q96DU9 382 aaKnown RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 FCRL2Q96LA5 508 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PEBP4Q96S96 227 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 FERMT1Q9BQL6 677 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 SLC46A2Q9BY10 475 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 SIK2Q9H0K1 926 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 PCDH18Q9HCL0 1135 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 GDE1Q9NZC3 331 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 OR12D3Q9UGF7 316 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 FEZ2Q9UHY8 353 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-218ENST00000556343 ARHGAP26Q9UNA1 814 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 MRFAP1Q9Y605 127 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 CPQQ9Y646 472 aa9.54□□□□□ -0.88
ACTN1-218ENST00000556343 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 hCG_1818297A0A087WSY0 165 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 E2F8A0AVK6 867 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 F5H5T6 163 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 PI4K2BG5E9Z4 385 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 KRIT1O00522 736 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 SLC9A3R1O14745 358 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 APOL1O14791 398 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 FGF10O15520 208 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 STC2O76061 302 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 IGLV3-27P01718 113 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 IRF1P10914 325 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TCF4P15884 667 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 GJA1P17302 382 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CORO1AP31146 461 aaKnown RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 SERPINB6P35237 376 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CHKAP35790 457 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CDKN2BP42772 138 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 MARCKSL1P49006 195 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 ARSEP51690 589 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 LMNB2Q03252 620 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 DPYSL3Q14195 570 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 KAZNQ674X7 775 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TXNRD3NBQ6F5E7 133 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 RWDD4Q6NW29 188 aaKnown RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 SYCE2Q6PIF2 218 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 MFSD7Q6UXD7 560 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 LZTR1Q8N653 840 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CELF5Q8N6W0 485 aaKnown RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 FAM71BQ8TC56 605 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TBC1D31Q96DN5 1066 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms