RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 KIR2DL1P43626 348 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 FNTBP49356 437 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 UBASH3AP57075 661 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ZNF445P59923 1031 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 DMC1Q14565 340 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 MPPE1Q53F39 396 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ZC3H12AQ5D1E8 599 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 FAM102AQ5T9C2 384 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 HEATR6Q6AI08 1181 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 NADSYN1Q6IA69 706 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 RFWD3Q6PCD5 774 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 MMS22LQ6ZRQ5 1243 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 SYT13Q7L8C5 426 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ALYREFQ86V81 257 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ALLCQ8N6M5 410 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ZBTB44Q8NCP5 570 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 AZIN2Q96A70 460 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 TMA16Q96EY4 203 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 HHIPQ96QV1 700 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 PCDHB18PQ96TA0 734 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 TSPY26PQ9H489 355 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 ZDHHC4Q9NPG8 344 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 SEPT11Q9NVA2 429 aaKnown RBP15.79■□□□□ 0.12
ACTN1-217ENST00000556203 DDIT4Q9NX09 232 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 COX16Q9P0S2 106 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 FBXO10Q9UK96 956 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 CLEC4EQ9ULY5 219 aa15.79■□□□□ 0.12
ACTN1-217ENST00000556203 LRRC53A6NM62 1247 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 GOLGA8SH3BPF8 625 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 GFRA2O00451 464 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 CCDC172P0C7W6 258 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 UNGP13051 313 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 FERP16591 822 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 HOXD9P28356 352 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 HOXA6P31267 233 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 SLC6A4P31645 630 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 GBP1P32455 592 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 NOS2P35228 1153 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 SCNN1AP37088 669 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 MATKP42679 507 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 PXNP49023 591 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 MRE11P49959 708 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 SGSHP51688 502 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 EIF4EBP2Q13542 120 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 FAM133BQ5BKY9 247 aaKnown RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 IL17RCQ8NAC3 791 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 SLC30A5Q8TAD4 765 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 AGPAT1Q99943 283 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 DDX50Q9BQ39 737 aaKnown RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 C11orf70Q9BRQ4 267 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 XPO7Q9UIA9 1087 aaKnown RBP15.78■□□□□ 0.12
ACTN1-217ENST00000556203 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
ACTN1-217ENST00000556203 PRRT4C9JH25 899 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 LILRB5O75023 590 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 MMP8P22894 467 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 NSFP46459 744 aaKnown RBP15.77■□□□□ 0.12
ACTN1-217ENST00000556203 NME3Q13232 169 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 CLEC16AQ2KHT3 1053 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 HSF5Q4G112 596 aaPredicted RBP15.77■□□□□ 0.12
ACTN1-217ENST00000556203 PIK3R6Q5UE93 754 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 LRSAM1Q6UWE0 723 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 PHLDB2Q86SQ0 1253 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 LONP2Q86WA8 852 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 ZNF513Q8N8E2 541 aaPredicted RBP15.77■□□□□ 0.12
ACTN1-217ENST00000556203 KCNV2Q8TDN2 545 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 RNF34Q969K3 372 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 SEMA4AQ9H3S1 761 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 HCN2Q9UL51 889 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 STAP1Q9ULZ2 295 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 MMP17Q9ULZ9 603 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 SLC27A6Q9Y2P4 619 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 STARD13Q9Y3M8 1113 aa15.77■□□□□ 0.12
ACTN1-217ENST00000556203 MYOFQ9NZM1 2061 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 M0QYT0 321 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SGK1O00141 431 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 TBL1XO60907 577 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 APBB3O95704 486 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SLC2A3P11169 496 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 ABCB4P21439 1286 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 CCR1P32246 355 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SULT1E1P49888 294 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 CENPCQ03188 943 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 ASIC2Q16515 512 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 CRY1Q16526 586 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 GEN1Q17RS7 908 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 EOGTQ5NDL2 527 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SFMBT2Q5VUG0 894 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-217ENST00000556203 EGFLAMQ63HQ2 1017 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 ASCL5Q7RTU5 278 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 IRF2BP2Q7Z5L9 587 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 ANKS1BQ7Z6G8 1248 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 CAMKK1Q8N5S9 505 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 TSTD1Q8NFU3 115 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms