RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 FAM153AQ9UHL3 310 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 FAM205CA6NFA0 338 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 USP27XA6NNY8 438 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TRIM13O60858 407 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 CATP04040 527 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 CKBP12277 381 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ST13P50502 369 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ZDHHC20Q5W0Z9 365 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 ACMSDQ8TDX5 336 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 MS4A14Q96JA4 679 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 PRMT6Q96LA8 375 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 PAFAH2Q99487 392 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 CCDC3Q9BQI4 270 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 EXOSC4Q9NPD3 245 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 MIEF1Q9NQG6 463 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 THAP1Q9NVV9 213 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 DNALI1O14645 258 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 UBDO15205 165 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SLC37A4O43826 429 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 GRAP2O75791 330 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 CSPG5O95196 566 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 NUDT2P50583 147 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 NFYCQ13952 458 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TMC7Q7Z402 723 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 TMPRSS6Q8IU80 811 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SLC9A9Q8IVB4 645 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 PHACTR4Q8IZ21 702 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 HELQQ8TDG4 1101 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SPATA5L1Q9BVQ7 753 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 SAR1AQ9NR31 198 aa10.99□□□□□ -0.65
ACTN1-216ENST00000556083 PAPOLBQ9NRJ5 636 aaKnown RBP10.99□□□□□ -0.65
ACTN1-216ENST00000556083 RBM22Q9NW64 420 aaKnown RBP eCLIP10.99□□□□□ -0.651e-6■■□□□ 11.9
ACTN1-216ENST00000556083 ADGRA2Q96PE1 1338 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 APOC4-APOC2K7ER74 178 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 APOC2P02655 101 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CLTBP09497 229 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PTPN4P29074 926 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SERPINA4P29622 427 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CHKAP35790 457 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CCNG1P51959 295 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ATXN3P54252 364 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SMIM11AP58511 58 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 RIOX2Q8IUF8 465 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ZFP28Q8NHY6 868 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SLC25A23Q9BV35 468 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 HMX1Q9NP08 348 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 DERAQ9Y315 318 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CEP152O94986 1710 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PSMC3P17980 439 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 DGKAP23743 735 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CYP2F1P24903 491 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 GTF2E2P29084 291 aaKnown RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 NOS2P35228 1153 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 RPL22P35268 128 aaKnown RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 BLVRAP53004 296 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 RAB14P61106 215 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PARP6Q2NL67 630 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 GPR141Q7Z602 305 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SCUBE1Q8IWY4 988 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 BTN2A2Q8WVV5 523 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 OSBPL6Q9BZF3 934 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 POPDC2Q9HBU9 364 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 DDX43Q9NXZ2 648 aaKnown RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PAIP2BQ9ULR5 123 aaKnown RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PTCH2Q9Y6C5 1203 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ASTN2O75129 1339 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CENPXA8MT69 81 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 BTNL10A8MVZ5 291 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 RNF103O00237 685 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SGTAO43765 313 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF862O60290 1169 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 PRKCIP41743 596 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 CLCN3P51790 818 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SLC6A3Q01959 620 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ARMCX4Q5H9R4 360 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SNX30Q5VWJ9 437 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 USP45Q70EL2 814 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 SAMD7Q7Z3H4 446 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 KATNAL2Q8IYT4 538 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 AGR3Q8TD06 166 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 HTR3CQ8WXA8 447 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 FAM111AQ96PZ2 611 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 APOL4Q9BPW4 351 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 ADPRHL2Q9NX46 363 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 COPG2Q9UBF2 871 aa10.98□□□□□ -0.65
ACTN1-216ENST00000556083 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 URADA6NGE7 173 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 ZNF185O15231 689 aa10.97□□□□□ -0.65
ACTN1-216ENST00000556083 SGPL1O95470 568 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms