RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 CAPN12Q6ZSI9 719 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 ARHGEF18Q6ZSZ5 1173 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 DBF4BQ8NFT6 615 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 SH3TC2Q8TF17 1288 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 SEPT8Q92599 483 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 XPO6Q96QU8 1125 aaKnown RBP10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 CCT8L2Q96SF2 557 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 ZCWPW1Q9H0M4 648 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 RABEP2Q9H5N1 569 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 ETNK1Q9HBU6 452 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 ABCC13Q9NSE7 274 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 EURLQ9NYK6 297 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 RSPH14Q9UHP6 348 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 RAD54BQ9Y620 910 aa10.43□□□□□ -0.74
EFCAB11-209ENST00000556005 RASA4BC9J798 803 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 EBAG9O00559 213 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 NCAM2O15394 837 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 RASA4O43374 803 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SPAG6O75602 509 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ALDH2P05091 517 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SSTR1P30872 391 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CCT5P48643 541 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 GLUD2P49448 558 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SLC5A3P53794 718 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TPI1P60174 286 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 YWHAGP61981 247 aaKnown RBP eCLIP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SARNPP82979 210 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SEMA3BQ13214 749 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 BTBD8Q5XKL5 378 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CTU1Q7Z7A3 348 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CYP4X1Q8N118 509 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 MCUQ8NE86 351 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SCAMP5Q8TAC9 235 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 MAML1Q92585 1016 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 RNF34Q969K3 372 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 FUBP3Q96I24 572 aaKnown RBP eCLIP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 EPAS1Q99814 870 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TKTL2Q9H0I9 626 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 UNC93B1Q9H1C4 597 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 KCNK9Q9NPC2 374 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 DNAJB4Q9UDY4 337 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 RABGEF1Q9UJ41 708 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 LRFN2Q9ULH4 789 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CLUHO75153 1309 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TSC2P49815 1807 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 A0A0A0MRY4 1105 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TNFRSF10BO14763 440 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 DCLK1O15075 740 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 HOXA2O43364 376 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 MFSD11O43934 449 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 BRAFP15056 766 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ERCC2P18074 760 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TPSB2P20231 275 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 GCAP28676 217 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CYP2C18P33260 490 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 FDFT1P37268 417 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ELK3P41970 407 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 AP1B1Q10567 949 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 GPNMBQ14956 572 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TMED2Q15363 201 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TPSAB1Q15661 275 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ANKRD20A2Q5SQ80 823 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SYCP2LQ5T4T6 812 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ANKRD20A1Q5TYW2 823 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ANKRD20A3Q5VUR7 823 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 VSTM1Q6UX27 236 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SRRM1Q8IYB3 904 aaKnown RBP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 CCNYQ8ND76 341 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 FBF1Q8TES7 1133 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 LRRN4Q8WUT4 740 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 LRRC39Q96DD0 335 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SPATA13Q96N96 652 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 LGMNQ99538 433 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ACSS3Q9H6R3 686 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TMEM51Q9NW97 253 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 SENP1Q9P0U3 644 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 PSMC3IPQ9P2W1 217 aaPredicted RBP10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 OR12D3Q9UGF7 316 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 ADAM28Q9UKQ2 775 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 MFHAS1Q9Y4C4 1052 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 TEX264Q9Y6I9 313 aa10.42□□□□□ -0.74
EFCAB11-209ENST00000556005 FRMPD3Q5JV73 1810 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 TMEM120BA0PK00 339 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FAM72CH0Y354 149 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 TRIM66O15016 1216 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 OPHN1O60890 802 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 METTL18O95568 372 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 OR4Q2P0C623 313 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 KRT15P19012 456 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 SEMA5AQ13591 1074 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 PRKD1Q15139 912 aaPredicted RBP10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FAXCQ5TGI0 409 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FAM72AQ5TYM5 149 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FAM72DQ6L9T8 149 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FOXR1Q6PIV2 292 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 TAC4Q86UU9 113 aa10.41□□□□□ -0.74
EFCAB11-209ENST00000556005 FAM72BQ86X60 149 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms