RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 NUGGCQ68CJ6 796 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 TXNRD3NBQ6F5E7 133 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SYCE2Q6PIF2 218 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 MAP7D3Q8IWC1 876 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 UNC45BQ8IWX7 931 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ARL14EPQ8N8R7 260 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ATP6V0D2Q8N8Y2 350 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ALG3Q92685 438 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 PABPC5Q96DU9 382 aaKnown RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 TCEAL4Q96EI5 215 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SLC39A13Q96H72 371 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 APOL5Q9BWW9 433 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 CARD9Q9H257 536 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 SLITRK6Q9H5Y7 841 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 DHX35Q9H5Z1 703 aaKnown RBP11.45□□□□□ -0.58
TMEM260-208ENST00000555905 TASP1Q9H6P5 420 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 KLHL11Q9NVR0 708 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 ARHGEF38Q9NXL2 777 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 FZD10Q9ULW2 581 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
TMEM260-208ENST00000555905 KCNU1A8MYU2 1149 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CEP104O60308 925 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 OLFM2O95897 454 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 MOCS2O96007 188 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 IGLV3-27P01718 113 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 AVPR1AP37288 418 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CDH6P55285 790 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 COPS2P61201 443 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 SLC7A9P82251 487 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 AMPD2Q01433 879 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 PDK2Q15119 407 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CLUL1Q15846 466 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 ATP13A4Q4VNC1 1196 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 ATAT1Q5SQI0 421 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 ACBD5Q5T8D3 534 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CCDC181Q5TID7 509 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CYP4V2Q6ZWL3 525 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 DDX42Q86XP3 938 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 BTN2A3PQ96KV6 586 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 FCRL2Q96LA5 508 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 RIPOR3Q96MK2 946 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 SLC22A12Q96S37 553 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 HAPLN3Q96S86 360 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CYP2S1Q96SQ9 504 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 GPATCH2LQ9NWQ4 482 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 SMPD4Q9NXE4 827 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
TMEM260-208ENST00000555905 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 PI4K2BG5E9Z4 385 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 H3BRJ5 948 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 SRGAP2O75044 1071 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 TBX10O75333 385 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 MOSPD3O75425 235 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 PAGE1O75459 146 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 IRF1P10914 325 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 PYGMP11217 842 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 CEBPBP17676 345 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 KDELR1P24390 212 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ARL4AP40617 200 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 SLC11A2P49281 568 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ZNF135P52742 658 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ZNF211Q13398 564 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 COL19A1Q14993 1142 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 DPYSL2Q16555 572 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 PPP6R3Q5H9R7 873 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 STXBP5Q5T5C0 1151 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 DCAF12L1Q5VU92 463 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 SPOCD1Q6ZMY3 1216 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ITFG1Q8TB96 612 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 COG1Q8WTW3 980 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ING5Q8WYH8 240 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 RAPGEF5Q92565 580 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 NAP1L3Q99457 506 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 EPAS1Q99814 870 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 MAK16Q9BXY0 300 aaKnown RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 DCLK3Q9C098 648 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 SIK2Q9H0K1 926 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 GKN1Q9NS71 199 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 RNF14Q9UBS8 474 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 CDC23Q9UJX2 597 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 LSM7Q9UK45 103 aaKnown RBP11.43□□□□□ -0.58
TMEM260-208ENST00000555905 ARHGAP26Q9UNA1 814 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 CPQQ9Y646 472 aa11.43□□□□□ -0.58
TMEM260-208ENST00000555905 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms