RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 EFHC1Q5JVL4 640 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 ADGRF1Q5T601 910 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 EGFLAMQ63HQ2 1017 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 NADSYN1Q6IA69 706 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 SLC26A9Q7LBE3 791 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 LONP2Q86WA8 852 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 ZNF677Q86XU0 584 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 DEFB106AQ8N104 65 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 ZNF513Q8N8E2 541 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 ZNF397Q8NF99 534 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-219ENST00000555563 DDI1Q8WTU0 396 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 CPA5Q8WXQ8 436 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 EPC1Q9H2F5 836 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 FAM204AQ9H8W3 233 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 FBXO10Q9UK96 956 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 HCN2Q9UL51 889 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 MMP17Q9ULZ9 603 aa14.27□□□□□ -0.13
SHMT2-219ENST00000555563 A0A1B0GTH6 734 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 SGK1O00141 431 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ACSL4O60488 711 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ADAM23O75077 832 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 MOCS2O96007 188 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 LMNAP02545 664 aaKnown RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 CHRNB2P17787 502 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 GABRB2P47870 512 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ZNF445P59923 1031 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 CDK17Q00537 523 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ARID5AQ03989 594 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 FILIP1LQ4L180 1135 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 C2CD6Q53TS8 623 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 RFWD3Q6PCD5 774 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 NUDT18Q6ZVK8 323 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 WDR5BQ86VZ2 330 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ERICH1Q86X53 443 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 ZDHHC17Q8IUH5 632 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 SUMF1Q8NBK3 374 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 TXNDC5Q8NBS9 432 aaKnown RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 TSTD1Q8NFU3 115 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 DDIT4Q9NX09 232 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 XPO7Q9UIA9 1087 aaKnown RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 SMG5Q9UPR3 1016 aaKnown RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 SLC27A6Q9Y2P4 619 aa14.26□□□□□ -0.13
SHMT2-219ENST00000555563 PTPRZ1P23471 2315 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-219ENST00000555563 SYNJ2BP-COX16A0A087WUM0 186 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 APBB3O95704 486 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 CAVIN2O95810 425 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 SERPINC1P01008 464 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 APOEP02649 317 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 SCNN1AP37088 669 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 TPM4P67936 248 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 EIF4EBP2Q13542 120 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 CRY1Q16526 586 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 GEN1Q17RS7 908 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 ZC3H12AQ5D1E8 599 aaKnown RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 EOGTQ5NDL2 527 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 FAM102AQ5T9C2 384 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 PIK3R6Q5UE93 754 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 OTUD1Q5VV17 481 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 TMEM92Q6UXU6 159 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 TRIM72Q6ZMU5 477 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 MMS22LQ6ZRQ5 1243 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 XYLT1Q86Y38 959 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 CAMKK1Q8N5S9 505 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 MSANTD4Q8NCY6 345 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 BAP1Q92560 729 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 AZIN2Q96A70 460 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 C18orf8Q96DM3 657 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 NUCKS1Q9H1E3 243 aaKnown RBP14.25□□□□□ -0.13
SHMT2-219ENST00000555563 COX16Q9P0S2 106 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 STARD13Q9Y3M8 1113 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 VPS13AQ96RL7 3174 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 EML5Q05BV3 1969 aa14.25□□□□□ -0.13
SHMT2-219ENST00000555563 DMDP11532 3685 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 CCDC163A0A0D9SF12 145 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 A0A1W2PQC6 194 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 GOLGA8SH3BPF8 625 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 HRO43593 1189 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 MMP8P22894 467 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 MATKP42679 507 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 DGKEP52429 567 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 ANO7Q6IWH7 933 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 ERMP1Q7Z2K6 904 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 TRMT11Q7Z4G4 463 aaKnown RBP14.24□□□□□ -0.13
SHMT2-219ENST00000555563 ANKS1BQ7Z6G8 1248 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 TMA16Q96EY4 203 aaKnown RBP14.24□□□□□ -0.13
SHMT2-219ENST00000555563 MYEOVQ96EZ4 313 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 BTN2A3PQ96KV6 586 aa14.24□□□□□ -0.13
SHMT2-219ENST00000555563 PCDHB18PQ96TA0 734 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms