RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NKD2Q969F2 451 aaPredicted RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 TMA16Q96EY4 203 aaKnown RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 PIWIL1Q96J94 861 aaKnown RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SRP54-206ENST00000555317 SLC2A13Q96QE2 648 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 SEMA4AQ9H3S1 761 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRP54-206ENST00000555317 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 R4GN57 208 aa12.58□□□□□ -0.4
SRP54-206ENST00000555317 MYO15AQ9UKN7 3530 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 ACSL4O60488 711 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 KLF8O95600 359 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 CCR1P32246 355 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 NOS2P35228 1153 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 SCNN1AP37088 669 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 MATKP42679 507 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 GABRB2P47870 512 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 NME3Q13232 169 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 MTA1Q13330 715 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 DMC1Q14565 340 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 NR1I3Q14994 352 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 E2F5Q15329 346 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 HSF5Q4G112 596 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 ZC3H12AQ5D1E8 599 aaKnown RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 SFMBT2Q5VUG0 894 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 FYB2Q5VWT5 728 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 SYT13Q7L8C5 426 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 ANKS1BQ7Z6G8 1248 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 XYLT1Q86Y38 959 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 FAM217AQ8IXS0 508 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 ZNF513Q8N8E2 541 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 ATP6V0D2Q8N8Y2 350 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 ZNF557Q8N988 423 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 HJURPQ8NCD3 748 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 TSTD1Q8NFU3 115 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 USP33Q8TEY7 942 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 UCMAQ8WVF2 138 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 EZH1Q92800 747 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 AZIN2Q96A70 460 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 BTN2A3PQ96KV6 586 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 FCRL2Q96LA5 508 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
SRP54-206ENST00000555317 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRP54-206ENST00000555317 STOML2Q9UJZ1 356 aa12.57□□□□□ -0.4
SRP54-206ENST00000555317 FRYLO94915 3013 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 A0A0A0MRY4 1105 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 M0QYT0 321 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 ZBTB24O43167 697 aaPredicted RBP12.56□□□□□ -0.4
SRP54-206ENST00000555317 CBFA2T2O43439 604 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 APBB3O95704 486 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
SRP54-206ENST00000555317 CALB1P05937 261 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CHRNB2P17787 502 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 SULT1E1P49888 294 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CLEC16AQ2KHT3 1053 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 EOGTQ5NDL2 527 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 RFWD3Q6PCD5 774 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 PHTF2Q8N3S3 785 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CCDC33Q8N5R6 958 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 TXNDC5Q8NBS9 432 aaKnown RBP12.56□□□□□ -0.4
SRP54-206ENST00000555317 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 IQCDQ96DY2 449 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 HHIPQ96QV1 700 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 SLC2A11Q9BYW1 496 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 ADAM22Q9P0K1 906 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 IFNKQ9P0W0 207 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 RAB23Q9ULC3 237 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 DMDP11532 3685 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 SPAG17Q6Q759 2223 aa12.56□□□□□ -0.4
SRP54-206ENST00000555317 ANKRD62A6NC57 917 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 F5H5T6 163 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 K7ESF4 209 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 TRIM24O15164 1050 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 TBL1XO60907 577 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 F9P00740 461 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 IGLV3-25P01717 112 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 TDGF1P13385 188 aa12.55□□□□□ -0.4
SRP54-206ENST00000555317 DESP17661 470 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms