RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
TDP1-211ENST00000555178 AP1M1Q9BXS5 423 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 GREM1O60565 184 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 OLFM2O95897 454 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 RALAP11233 206 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 FOSL2P15408 326 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 HDCP19113 662 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 CXCR3P49682 368 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 IRAK1P51617 712 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 HADHQ16836 314 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 LRRC38Q5VT99 294 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 KAZNQ674X7 775 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 POLNQ7Z5Q5 900 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 RASGEF1CQ8N431 466 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 NETO2Q8NC67 525 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 OVCA2Q8WZ82 227 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PPP2R3CQ969Q6 453 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 SLC39A13Q96H72 371 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PBKQ96KB5 322 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 MYADMQ96S97 322 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 FAM118BQ9BPY3 351 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 POMKQ9H5K3 350 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 DZANK1Q9NVP4 752 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.17□□□□□ -0.62
TDP1-211ENST00000555178 AP4E1Q9UPM8 1137 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.17□□□□□ -0.62
TDP1-211ENST00000555178 MRPS23Q9Y3D9 190 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 CPQQ9Y646 472 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 V9GYY5 206 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 TRDMT1O14717 391 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 MOCS2O96007 188 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 MBL2P11226 248 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 KCNA5P22460 613 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 CDH6P55285 790 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 WHAMMP3Q1A5X7 153 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PPP6R3Q5H9R7 873 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 CCDC181Q5TID7 509 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 GET4Q7L5D6 327 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 C14orf80Q86SX3 495 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PDZD8Q8NEN9 1154 aa11.17□□□□□ -0.62
TDP1-211ENST00000555178 PGAP3Q96FM1 320 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 DHX35Q9H5Z1 703 aaKnown RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 UXTQ9UBK9 157 aaPredicted RBP11.17□□□□□ -0.62
TDP1-211ENST00000555178 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 STC2O76061 302 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 ZRANB2O95218 330 aaKnown RBP eCLIP11.16□□□□□ -0.62
TDP1-211ENST00000555178 IGLV3-27P01718 113 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 KRT7P08729 469 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 KDELR1P24390 212 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 VIPR2P41587 438 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 CDKN2BP42772 138 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 PSEN1P49768 467 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 ARSEP51690 589 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 DPYSL3Q14195 570 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 NAA30Q147X3 362 aaPredicted RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 LONRF2Q1L5Z9 754 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 ERMARDQ5T6L9 678 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 SEL1L2Q5TEA6 688 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 SPOCD1Q6ZMY3 1216 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 ARHGAP18Q8N392 663 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 NOA1Q8NC60 698 aaKnown RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 EXD1Q8NHP7 514 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 MRPS31Q92665 395 aaKnown RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 FGF13Q92913 245 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 USP13Q92995 863 aaPredicted RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 CALN1Q9BXU9 219 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 TKTL2Q9H0I9 626 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 FZD10Q9ULW2 581 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 MFHAS1Q9Y4C4 1052 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 MIA3Q5JRA6 1907 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 TCF20Q9UGU0 1960 aaKnown RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 KCNU1A8MYU2 1149 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 CES2O00748 559 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 CKMP06732 381 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 FSHRP23945 695 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 IL4RP24394 825 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 CDC25CP30307 473 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 TBX4P57082 545 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 DYNLT1P63172 113 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 TFF2Q03403 129 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 PIK3R6Q5UE93 754 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 SLC13A5Q86YT5 568 aaPredicted RBP11.16□□□□□ -0.62
TDP1-211ENST00000555178 CMTM8Q8IZV2 173 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 SMRP1Q8NCR6 262 aa11.16□□□□□ -0.62
TDP1-211ENST00000555178 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms