RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PUM3	Q15397	648 aa	Known RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	CNN3	Q15417	329 aa	Known RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	CAVIN4	Q5BKX8	364 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	APOA5	Q6Q788	366 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	C17orf99	Q6UX52	265 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	MAEA	Q7L5Y9	396 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	ERO1B	Q86YB8	467 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	IL31RA	Q8NI17	732 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF384	Q8TF68	577 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	TBC1D22A	Q8WUA7	517 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	FAM136A	Q96C01	138 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	DUSP26	Q9BV47	211 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	C22orf23	Q9BZE7	217 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	OBP2A	Q9NY56	170 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	XPR1	Q9UBH6	696 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF112	Q9UJU3	913 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	TMX2	Q9Y320	296 aa		6.09	□□□□□ -1.43
PSMC6-208	ENST00000554956	BRCA2	P51587	3418 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	PTPRC	P08575	1304 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KIF16B	Q96L93	1317 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	LINC00473	A8K010	186 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	TMEM233	B4DJY2	109 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	IFIT1	P09914	478 aa	Known RBP	6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	ATXN1L	P0C7T5	689 aa	Known RBP	6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	CETP	P11597	493 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC5A1	P13866	664 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC7A1	P30825	629 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	LOXL3	P58215	753 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	NXPH1	P58417	271 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	PPIL2	Q13356	520 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	IQCB1	Q15051	598 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	FKBP1C	Q5VVH2	108 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	LAYN	Q6UX15	382 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC15A4	Q8N697	577 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KBTBD7	Q8WVZ9	684 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	FAM151A	Q8WW52	585 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	FKBP10	Q96AY3	582 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	MEIS3	Q99687	375 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KLK15	Q9H2R5	256 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	DDX4	Q9NQI0	724 aa	Known RBP	6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KLC4	Q9NSK0	619 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	SERTAD3	Q9UJW9	196 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	TNN	Q9UQP3	1299 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	INSL6	Q9Y581	213 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956		A0A1B0GUL6	1792 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KAT6A	Q92794	2004 aa		6.08	□□□□□ -1.44
PSMC6-208	ENST00000554956	KIAA0100	Q14667	2235 aa	Known RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	CFAP69	A5D8W1	941 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	DDTL	A6NHG4	134 aa	Predicted RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	hCG_1984214	I3L0E3	225 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	OVOL3	O00110	214 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	PDHX	O00330	501 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	BTN3A1	O00481	513 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	TBX3	O15119	743 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ERBB2	P04626	1255 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	NR2F6	P10588	404 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	VIPR2	P41587	438 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	GRIA3	P42263	894 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	PXN	P49023	591 aa	Predicted RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	TIMM10	P62072	90 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	PPAT	Q06203	517 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	CTBP1	Q13363	440 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	HDAC1	Q13547	482 aa	Predicted RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	GALE	Q14376	348 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC9C1	Q4G0N8	1177 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ARHGAP40	Q5TG30	622 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZNF783	Q6ZMS7	281 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ADGRG3	Q86Y34	549 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	FAM98A	Q8NCA5	519 aa	Known RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	CAGE1	Q8TC20	777 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	MAML1	Q92585	1016 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	RFK	Q969G6	155 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	SMURF2	Q9HAU4	748 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	SMC4	Q9NTJ3	1288 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ASB6	Q9NWX5	421 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	L1RE1	Q9UN81	338 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	GABRQ	Q9UN88	632 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	ST3GAL5	Q9UNP4	418 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	SSX2IP	Q9Y2D8	614 aa		6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	MRPS17	Q9Y2R5	130 aa	Known RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	LRRFIP2	Q9Y608	721 aa	Known RBP	6.07	□□□□□ -1.44
PSMC6-208	ENST00000554956	CENPF	P49454	3210 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	RFX7	Q2KHR2	1363 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	OTOF	Q9HC10	1997 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956		A0A087WWL8	130 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956		H0YGN5	161 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	WDHD1	O75717	1129 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	CIAO1	O76071	339 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	PCSK6	P29122	969 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	PSMC4	P43686	418 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	CLCN2	P51788	898 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	CACNA2D1	P54289	1103 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	TBCC	Q15814	346 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	SLC4A8	Q2Y0W8	1093 aa		6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ZIK1	Q3SY52	487 aa	Predicted RBP	6.06	□□□□□ -1.44
PSMC6-208	ENST00000554956	ALDH1L2	Q3SY69	923 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms