RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PIAS1O75925 651 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 TRPC1P48995 793 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 NFX1Q12986 1120 aaKnown RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 HIF1AQ16665 826 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 SH2D5Q6ZV89 423 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 GPR141Q7Z602 305 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 CHERPQ8IWX8 916 aaKnown RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 ZNF512Q96ME7 567 aaPredicted RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 OLFM1Q99784 485 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 RIMS3Q9UJD0 308 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 CARD8Q9Y2G2 431 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 WDR64B1ANS9 1081 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 TMEM114B3SHH9 223 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 TLR3O15455 904 aaKnown RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 LIASO43766 372 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 MGEA5O60502 916 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A9O60656 530 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 BANF1O75531 89 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 TCF4P15884 667 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A6P19224 532 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 ITGAXP20702 1163 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 ACO1P21399 889 aaKnown RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A1P22309 533 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A4P22310 534 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A3P35503 534 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A5P35504 534 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 KPNA1P52294 538 aaPredicted RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 WNT7BP56706 349 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 MCF2L2Q86YR7 1114 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 PCYOX1LQ8NBM8 494 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 PPP1R14CQ8TAE6 165 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 EBF4Q9BQW3 602 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 GCOM2Q9BZD3 368 aaPredicted RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A7Q9HAW7 530 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A10Q9HAW8 530 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 UGT1A8Q9HAW9 530 aa16.12■□□□□ 0.17
SYNE3-203ENST00000554873 ZNF70Q9UC06 446 aaPredicted RBP16.12■□□□□ 0.17
SYNE3-203ENST00000554873 BMP10O95393 424 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 HLA-DRAP01903 254 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 CCDC130P13994 396 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 JAK3P52333 1124 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 NDST2P52849 883 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 ESRRGP62508 458 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 NOMO3P69849 1222 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 PGM5Q15124 567 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 KCNJ8Q15842 424 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 TEX44Q53QW1 395 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 PLEKHA7Q6IQ23 1121 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 ZFP1Q6P2D0 407 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 ABRAQ8N0Z2 381 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 BHMTQ93088 406 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 CCDC138Q96M89 665 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 CTRCQ99895 268 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 MRPL47Q9HD33 250 aaKnown RBP16.11■□□□□ 0.17
SYNE3-203ENST00000554873 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 MYRFQ9Y2G1 1151 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 H3BNH8 94 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 FAM189A1O60320 539 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 GARTP22102 1010 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 DMPKQ09013 629 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 BRDTQ58F21 947 aaPredicted RBP16.11■□□□□ 0.17
SYNE3-203ENST00000554873 TAS1R3Q7RTX0 852 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 PTCD2Q8WV60 388 aaKnown RBP16.11■□□□□ 0.17
SYNE3-203ENST00000554873 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
SYNE3-203ENST00000554873 RNF11Q9Y3C5 154 aa16.11■□□□□ 0.17
SYNE3-203ENST00000554873 CNTNAP1P78357 1384 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 COPEO14579 308 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 KDM1AO60341 852 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 CAPNS1P04632 268 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 PTK7Q13308 1070 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 CHI3L2Q15782 390 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 MOGQ16653 247 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 ZACNQ401N2 412 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 TDRD10Q5VZ19 366 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 CEP170P1Q96L14 293 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 MECRQ9BV79 373 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 RBMX2Q9Y388 322 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 TNNI1P19237 187 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 TXNL4AP83876 142 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 ZBED5Q49AG3 693 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 TMEM270Q6UE05 265 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 MFSD7Q6UXD7 560 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 HM13Q8TCT9 377 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 CMTM5Q96DZ9 223 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 MRPL46Q9H2W6 279 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 ZNF395Q9H8N7 513 aaPredicted RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
SYNE3-203ENST00000554873 SIRPGQ9P1W8 387 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 ERGIC3Q9Y282 383 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
SYNE3-203ENST00000554873 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms