RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CBWD6Q4V339 395 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 TCP11X2Q5H9J9 407 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 RAB41Q5JT25 222 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 CBWD3Q5JTY5 395 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 CBWD5Q5RIA9 395 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 KRT39Q6A163 491 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 PIGZQ86VD9 579 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 RBBP8NLQ8NC74 664 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 NDRG1Q92597 394 aaKnown RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 GATA6Q92908 595 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 HSPA12BQ96MM6 686 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 CLIC5Q9NZA1 410 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 RASAL2Q9UJF2 1139 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 SLC27A6Q9Y2P4 619 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 STON1Q9Y6Q2 735 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 ZFYVE26Q68DK2 2539 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 FAM208BQ5VWN6 2430 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-215ENST00000554656 PKD1L2Q7Z442 2459 aa11.08□□□□□ -0.64
SHMT2-215ENST00000554656 TMEM131Q92545 1883 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 NYNRINQ9P2P1 1898 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 SPAARA0A1B0GVQ0 90 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 TRIM49BA6NDI0 452 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 KCNJ18B7U540 433 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 GNA14O95837 355 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 TPM2P07951 284 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 SERPINF2P08697 491 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 RPL13P26373 211 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 IL12RB1P42701 662 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 PSEN1P49768 467 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 MARSP56192 900 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 ENPP2Q13822 863 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 KCNJ12Q14500 433 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 NR1I3Q14994 352 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 DUOXA1Q1HG43 343 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 FUT11Q495W5 492 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 TMEM215Q68D42 235 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 KIAA1324Q6UXG2 1013 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 UNQ6494/PRO21346Q6UXR6 183 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 IRF2BP1Q8IU81 584 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 FAM217AQ8IXS0 508 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 DRC7Q8IY82 874 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 PIWIL1Q96J94 861 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 HEXIM2Q96MH2 286 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 SCNM1Q9BWG6 230 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 THAP10Q9P2Z0 257 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 AGO1Q9UL18 857 aaKnown RBP11.07□□□□□ -0.64
SHMT2-215ENST00000554656 SLC6A14Q9UN76 642 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 DMXL2Q8TDJ6 3036 aa11.07□□□□□ -0.64
SHMT2-215ENST00000554656 UPK3BL1B0FP48 263 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 UPK3BL2E5RIL1 263 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 GFRA2O00451 464 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 HYAL3O43820 417 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 ZNF217O75362 1048 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 GJB3O75712 270 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 GABBR2O75899 941 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 RALAP11233 206 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 CD59P13987 128 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 PRKCHP24723 683 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 DPP6P42658 865 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 COPB1P53618 953 aaKnown RBP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 KRT31Q15323 416 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 PM20D1Q6GTS8 502 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 DENND1CQ8IV53 801 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 MINDY1Q8N5J2 469 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 UBR7Q8N806 425 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 SORCS1Q8WY21 1168 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 ZNF419Q96HQ0 510 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 FAXDC2Q96IV6 333 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 GTPBP2Q9BX10 602 aaKnown RBP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 ULBP1Q9BZM6 244 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 MARCH2Q9P0N8 246 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
SHMT2-215ENST00000554656 COQ4Q9Y3A0 265 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
SHMT2-215ENST00000554656 PLXNB3Q9ULL4 1909 aa11.05□□□□□ -0.64
SHMT2-215ENST00000554656 PTPRBP23467 1997 aa11.05□□□□□ -0.64
SHMT2-215ENST00000554656 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
SHMT2-215ENST00000554656 SLC12A8A0AV02 714 aa11.05□□□□□ -0.64
SHMT2-215ENST00000554656 CETN3O15182 167 aa11.05□□□□□ -0.64
SHMT2-215ENST00000554656 TRIM21P19474 475 aaKnown RBP11.05□□□□□ -0.64
SHMT2-215ENST00000554656 MAOBP27338 520 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms