RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 SERPINB11Q96P15 392 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 GABRG3Q99928 467 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 MIS12Q9H081 205 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 ZDHHC4Q9NPG8 344 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 VPS45Q9NRW7 570 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 ANO10Q9NW15 660 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 ELOVL2Q9NXB9 296 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DNAJC12Q9UKB3 198 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 PCDHGC3Q9UN70 934 aa9.09□□□□□ -0.95
ACTN1-213ENST00000554508 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.09□□□□□ -0.95
ACTN1-213ENST00000554508 A0A1W2PQF6 199 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 BCLAF3A2AJT9 711 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 KCNJ18B7U540 433 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CAPN9O14815 690 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 SLC30A4O14863 429 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 IRAK2O43187 625 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 MSI1O43347 362 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ACSL4O60488 711 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ZNF217O75362 1048 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CAVIN2O95810 425 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 FYNP06241 537 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 EEF1GP26641 437 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 MPLP40238 635 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 DPP6P42658 865 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 WASP42768 502 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 LIMK1P53667 647 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ATXN1P54253 815 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CREB5Q02930 508 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ENPP2Q13822 863 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 KCNJ12Q14500 433 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 STARD3Q14849 445 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 GEN1Q17RS7 908 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ZSCAN23Q3MJ62 389 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 MPP7Q5T2T1 576 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 SLC36A4Q6YBV0 504 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 LPCAT2Q7L5N7 544 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 WFIKKN2Q8TEU8 576 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 IPO4Q8TEX9 1081 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 FAM149B1Q96BN6 582 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 NOX5Q96PH1 765 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 ACOX2Q99424 681 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 POPDC2Q9HBU9 364 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 SIX2Q9NPC8 291 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 SAMSN1Q9NSI8 373 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CYTH4Q9UIA0 394 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 INVSQ9Y283 1065 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
ACTN1-213ENST00000554508 CNOT1A5YKK6 2376 aaKnown RBP9.08□□□□□ -0.96
ACTN1-213ENST00000554508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 E5RJQ4 531 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 FOXN3O00409 490 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 PES1O00541 588 aaKnown RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 PAPSS1O43252 624 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 TSPAN3O60637 253 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 GLI1P08151 1106 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 GABRG2P18507 467 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 CLCN1P35523 988 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 KRT9P35527 623 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 DHPSP49366 369 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 APBA1Q02410 837 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 ARID5AQ03989 594 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 PDCLQ13371 301 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 MAP7D1Q3KQU3 841 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 ANO6Q4KMQ2 910 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 AASDHQ4L235 1098 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 EFHC1Q5JVL4 640 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 PIK3R6Q5UE93 754 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 C11orf57Q6ZUT1 292 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 KIAA0907Q7Z7F0 614 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 FAM71AQ8IYT1 594 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 WDTC1Q8N5D0 677 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 DQX1Q8TE96 717 aaKnown RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 SLC39A13Q96H72 371 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 PPP1R13BQ96KQ4 1090 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 FCRL2Q96LA5 508 aaPredicted RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 NAT10Q9H0A0 1025 aaKnown RBP9.07□□□□□ -0.96
ACTN1-213ENST00000554508 ACP6Q9NPH0 428 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 ASNSD1Q9NWL6 643 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 CACNA2D2Q9NY47 1150 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 SLC12A6Q9UHW9 1150 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 NAALADL1Q9UQQ1 740 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 NFE2L3Q9Y4A8 694 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 CEP83Q9Y592 693 aa9.07□□□□□ -0.96
ACTN1-213ENST00000554508 STON1Q9Y6Q2 735 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms