RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TPM4P67936 248 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 NCAPHQ15003 741 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 PRR23BQ6ZRT6 265 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TOGARAM2Q6ZUX3 1019 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 CEP68Q76N32 757 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 RASSF3Q86WH2 238 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 AOPEPQ8N6M6 819 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 SLC2A11Q9BYW1 496 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TRIM5Q9C035 493 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 FAM207AQ9NSI2 230 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 POLR3BQ9NW08 1133 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-211ENST00000554310 PLK2Q9NYY3 685 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 FBXO10Q9UK96 956 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 TLR6Q9Y2C9 796 aa13.6□□□□□ -0.23
SHMT2-211ENST00000554310 SGK1O00141 431 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 GFRA2O00451 464 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 IRAK2O43187 625 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 HSF2BPO75031 334 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 LSM8O95777 96 aaKnown RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 HOXC13P31276 330 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 CDH5P33151 784 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 SRSF5Q13243 272 aaKnown RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 E2F5Q15329 346 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 EFHC1Q5JVL4 640 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 TAC4Q86UU9 113 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 DDI1Q8WTU0 396 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 AZIN2Q96A70 460 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 P2RY11Q96G91 374 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 PIWIL1Q96J94 861 aaKnown RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 HSD3B7Q9H2F3 369 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 PDCL3Q9H2J4 239 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 SYNCQ9H7C4 482 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 POLMQ9NP87 494 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-211ENST00000554310 TJP2Q9UDY2 1190 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.237e-7■■□□□ 12.7
SHMT2-211ENST00000554310 FRYLO94915 3013 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 CFAP54Q96N23 3096 aa13.59□□□□□ -0.23
SHMT2-211ENST00000554310 PLXND1Q9Y4D7 1925 aa13.58□□□□□ -0.23
SHMT2-211ENST00000554310 ANTXRLA6NF34 631 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 LRRC10BA6NIK2 292 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 NPC1O15118 1278 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 ADAM23O75077 832 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 IGLV3-25P01717 112 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 APOEP02649 317 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 HOXD9P28356 352 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 NTSR1P30989 418 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 KLK7P49862 253 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 JAM2P57087 298 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 EIF4HQ15056 248 aaKnown RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 SYCP1Q15431 976 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 PTPN20Q4JDL3 420 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 MPP7Q5T2T1 576 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 EMC10Q5UCC4 262 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 EGFLAMQ63HQ2 1017 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 ANO7Q6IWH7 933 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 SLC26A9Q7LBE3 791 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 C11orf74Q86VG3 221 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 ZNF677Q86XU0 584 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 ZNF557Q8N988 423 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 EPS8L1Q8TE68 723 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 SLC39A13Q96H72 371 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 SLC2A13Q96QE2 648 aa13.58□□□□□ -0.24
SHMT2-211ENST00000554310 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
SHMT2-211ENST00000554310 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ACSL4O60488 711 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 DAB1O75553 588 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 TRUB2O95900 331 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ERBB2P04626 1255 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 RETP07949 1114 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 HOXB2P14652 356 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 HNRNPLP14866 589 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 UBXN1Q04323 297 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 LPAL2Q16609 132 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 FAM133BQ5BKY9 247 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 RNF43Q68DV7 783 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 SDE2Q6IQ49 451 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 FAM183BPQ6ZVS7 135 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 APTXQ7Z2E3 356 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 CACNA2D4Q7Z3S7 1137 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 NOP9Q86U38 636 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms