RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 IL12RB1P42701 662 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 ZNF234Q14588 700 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 STILQ15468 1287 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 ADGRF1Q5T601 910 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 ISM2Q6H9L7 571 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 SFMBT1Q9UHJ3 866 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 PCDHB4Q9Y5E5 795 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 CHD8Q9HCK8 2581 aa19.59■□□□□ 0.73
CPSF2-203ENST00000554290 TSPAN3O60637 253 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 OPHN1O60890 802 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 OXTRP30559 389 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 DAOAP59103 153 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 SEMA3BQ13214 749 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 CNGA2Q16280 664 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 PKDCCQ504Y2 493 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 TMPRSS6Q8IU80 811 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 PPM1KQ8N3J5 372 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 MINDY1Q8N5J2 469 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 IRGQQ8WZA9 623 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 PRCCQ92733 491 aaPredicted RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 TMA16Q96EY4 203 aaKnown RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 SIPA1Q96FS4 1042 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 MKRN2Q9H000 416 aaKnown RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 FSCN3Q9NQT6 498 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 WSB2Q9NYS7 404 aaPredicted RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 USP36Q9P275 1121 aaKnown RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 STOML2Q9UJZ1 356 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 CLEC4EQ9ULY5 219 aa19.58■□□□□ 0.72
CPSF2-203ENST00000554290 KMT2BQ9UMN6 2715 aaPredicted RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 TNRC6BQ9UPQ9 1833 aaKnown RBP19.58■□□□□ 0.72
CPSF2-203ENST00000554290 CACNA1BQ00975 2339 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 BICDL2A1A5D9 508 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 P4HA2O15460 535 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 EPHX1P07099 455 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 ACADMP11310 421 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 PLEKHG6Q3KR16 790 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 KLHL10Q6JEL2 608 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 SERPINA13PQ6UXR4 307 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 PIP4P1Q86T03 277 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 WFIKKN2Q8TEU8 576 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 SLC35F5Q8WV83 523 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 TFAP2BQ92481 460 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 GOLGA1Q92805 767 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 TOE1Q96GM8 510 aaKnown RBP19.57■□□□□ 0.72
CPSF2-203ENST00000554290 CD93Q9NPY3 652 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 MAN1B1Q9UKM7 699 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.57■□□□□ 0.72
CPSF2-203ENST00000554290 PLA2G4CQ9UP65 541 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 NFE2L3Q9Y4A8 694 aa19.57■□□□□ 0.72
CPSF2-203ENST00000554290 MEI4A8MW99 385 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 M0QYV0 167 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 NCAM1P13591 858 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 CD44P16070 742 aaKnown RBP19.56■□□□□ 0.72
CPSF2-203ENST00000554290 HOXD9P28356 352 aaPredicted RBP19.56■□□□□ 0.72
CPSF2-203ENST00000554290 RGS7P49802 495 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 TPMTP51580 245 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 TTI2Q6NXR4 508 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 PMF1Q6P1K2 205 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 MSANTD2Q6P1R3 559 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 FOXR2Q6PJQ5 311 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 UNC45BQ8IWX7 931 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 RBBP8NLQ8NC74 664 aaPredicted RBP19.56■□□□□ 0.72
CPSF2-203ENST00000554290 CADM4Q8NFZ8 388 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 SORCS1Q8WY21 1168 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 GPR174Q9BXC1 333 aa19.56■□□□□ 0.72
CPSF2-203ENST00000554290 IRX2Q9BZI1 471 aaPredicted RBP19.56■□□□□ 0.72
CPSF2-203ENST00000554290 MSI1O43347 362 aaKnown RBP19.55■□□□□ 0.72
CPSF2-203ENST00000554290 FBXO21O94952 628 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 PROS1P07225 676 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 PRKCHP24723 683 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 SLC11A2P49281 568 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 TMEM215Q68D42 235 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 NELFBQ8WX92 580 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 HSFY1Q96LI6 401 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 NUP58Q9BVL2 599 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 WASF3Q9UPY6 502 aa19.55■□□□□ 0.72
CPSF2-203ENST00000554290 RNF225M0QZC1 329 aaPredicted RBP19.54■□□□□ 0.72
CPSF2-203ENST00000554290 GNA14O95837 355 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 IGLV3-19P01714 112 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 LTFP02788 710 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 MAOBP27338 520 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 HLA-FP30511 346 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 RDXP35241 583 aaKnown RBP19.54■□□□□ 0.72
CPSF2-203ENST00000554290 GCNT1Q02742 428 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 SLC14A1Q13336 389 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 HNRNPDQ14103 355 aaKnown RBP19.54■□□□□ 0.72
CPSF2-203ENST00000554290 FNDC3BQ53EP0 1204 aaKnown RBP19.54■□□□□ 0.72
CPSF2-203ENST00000554290 MPP7Q5T2T1 576 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 NUGGCQ68CJ6 796 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 CHST9Q7L1S5 443 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 EHBP1Q8NDI1 1231 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 OR2T3Q8NH03 318 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 LMO3Q8TAP4 145 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 DNASE2BQ8WZ79 361 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 ZDHHC5Q9C0B5 715 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 ABCB8Q9NUT2 735 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 DNAAF2Q9NVR5 837 aaKnown RBP19.54■□□□□ 0.72
CPSF2-203ENST00000554290 GGA2Q9UJY4 613 aa19.54■□□□□ 0.72
CPSF2-203ENST00000554290 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
CPSF2-203ENST00000554290 KCNJ18B7U540 433 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms