RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
TUBB3-204ENST00000554116 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
TUBB3-204ENST00000554116 BCAT2O15382 392 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-204ENST00000554116 NR3C1P04150 777 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 GNSP15586 552 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-204ENST00000554116 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 TAS1R2Q8TE23 839 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 TAF4BQ92750 862 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 SIPA1Q96FS4 1042 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 CRELD1Q96HD1 420 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 C6orf106Q9H6K1 298 aaPredicted RBP12.12□□□□□ -0.47
TUBB3-204ENST00000554116 TM7SF3Q9NS93 570 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 ELOVL2Q9NXB9 296 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 DKK4Q9UBT3 224 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 TRAF3IP3Q9Y228 551 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF462Q96JM2 2506 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 MAST4O15021 2626 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 PLXNA2O75051 1894 aa12.12□□□□□ -0.47
TUBB3-204ENST00000554116 A0A1B0GVT2 93 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 IKBKBO14920 756 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 HMBSP08397 361 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 HLA-EP13747 358 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 CORO1AP31146 461 aaKnown RBP12.11□□□□□ -0.47
TUBB3-204ENST00000554116 ACSL1P33121 698 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 CSNK1EP49674 416 aaKnown RBP12.11□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF132P52740 706 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 EFEMP1Q12805 493 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 PNOCQ13519 176 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 PTPRNQ16849 979 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 CACUL1Q86Y37 369 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 GUF1Q8N442 669 aaKnown RBP12.11□□□□□ -0.47
TUBB3-204ENST00000554116 HNRNPLLQ8WVV9 542 aaKnown RBP12.11□□□□□ -0.47
TUBB3-204ENST00000554116 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
TUBB3-204ENST00000554116 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 MIR1-1HGQ9H1L0 117 aa12.11□□□□□ -0.47
TUBB3-204ENST00000554116 MEI4A8MW99 385 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 TULP2O00295 520 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 KCNK3O14649 394 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 NPC1O15118 1278 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 HOXD9P28356 352 aaPredicted RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 HLA-FP30511 346 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 MATKP42679 507 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 CAMK2GQ13555 558 aaPredicted RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 STARD3Q14849 445 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 KIAA0907Q7Z7F0 614 aaPredicted RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 DENND1CQ8IV53 801 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 ZNF366Q8N895 744 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 SETD7Q8WTS6 366 aaKnown RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 NT5C1AQ9BXI3 368 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 RMND1Q9NWS8 449 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
TUBB3-204ENST00000554116 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 PCDHGB2Q9Y5G2 931 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 SNX11Q9Y5W9 270 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
TUBB3-204ENST00000554116 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 SMC2O95347 1197 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 P4HA1P13674 534 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 CD58P19256 250 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 NR2F2P24468 414 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 RPL13P26373 211 aaKnown RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 OXTRP30559 389 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 CHKAP35790 457 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 PIK3CAP42336 1068 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 GCLMP48507 274 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 PSEN1P49768 467 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 SGSHP51688 502 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 RAD23BP54727 409 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 COG7P83436 770 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 GOLGA8FQ08AF8 430 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 GOLGA8DPQ0D2H9 430 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ADAM9Q13443 819 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 TRIP4Q15650 581 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 NFIL3Q16649 462 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ANKS1BQ7Z6G8 1248 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 FAM124AQ86V42 546 aa12.09□□□□□ -0.47
TUBB3-204ENST00000554116 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-204ENST00000554116 ADAM32Q8TC27 787 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms