RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RAB20Q9NX57 234 aa8.14□□□□□ -1.11
ABCD4-220ENST00000553998 URB1O60287 2271 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 METTL12A8MUP2 240 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 GOLGA6L19H0YKK7 550 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 SCAMP3O14828 347 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CILPO75339 1184 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 RTN3O95197 1032 aaPredicted RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 VNN1O95497 513 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CER1O95813 267 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 ASS1P00966 412 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 HLA-DRAP01903 254 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CISD3P0C7P0 127 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 YWHAQP27348 245 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 MATKP42679 507 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 WASP42768 502 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CACNA2D1P54289 1103 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 MYL6P60660 151 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 PSMC1P62191 440 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CYP27A1Q02318 531 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 ENPP2Q13822 863 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 HLA-BQ31612 363 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF699Q32M78 642 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CBWD6Q4V339 395 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 VWA3BQ502W6 1294 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF667Q5HYK9 610 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CBWD3Q5JTY5 395 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CBWD5Q5RIA9 395 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 HECTD3Q5T447 861 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 GRAMD4Q6IC98 578 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CREBRFQ8IUR6 639 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 BBS7Q8IWZ6 715 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CHPFQ8IZ52 775 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 NUP93Q8N1F7 819 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 SLC39A7Q92504 469 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 TOE1Q96GM8 510 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CRELD1Q96HD1 420 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 FAM84AQ96KN4 292 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 PCED1AQ9H1Q7 454 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 NDST4Q9H3R1 872 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 MMRN2Q9H8L6 949 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 CD93Q9NPY3 652 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 WDR35Q9P2L0 1181 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 LIMA1Q9UHB6 759 aaKnown RBP8.13□□□□□ -1.11
ABCD4-220ENST00000553998 NME7Q9Y5B8 376 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 MYOFQ9NZM1 2061 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 TENM4Q6N022 2769 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 PLXNB3Q9ULL4 1909 aa8.13□□□□□ -1.11
ABCD4-220ENST00000553998 NPC1O15118 1278 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 BCAT2O15382 392 aaPredicted RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PAPSS1O43252 624 aaPredicted RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 TNFSF14O43557 240 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 ABL1P00519 1130 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PRB1P04280 392 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PDGFRBP09619 1106 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 NCAM1P13591 858 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PTPN1P18031 435 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 CDK11BP21127 795 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 ACO1P21399 889 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 OXTRP30559 389 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 GNL1P36915 607 aaPredicted RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 ABCG1P45844 678 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 TNNC1P63316 161 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 SUZ12Q15022 739 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 KRT31Q15323 416 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 WDR72Q3MJ13 1102 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 MDH1BQ5I0G3 518 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 MIIPQ5JXC2 388 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 TTC39CQ8N584 583 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 SETD7Q8WTS6 366 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 WBP2Q969T9 261 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 XPO6Q96QU8 1125 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 ELOVL4Q9GZR5 314 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 HSD3B7Q9H2F3 369 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 CYP3A43Q9HB55 503 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 FNDC3AQ9Y2H6 1198 aaKnown RBP8.12□□□□□ -1.11
ABCD4-220ENST00000553998 SH3BP1Q9Y3L3 701 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 RAD54BQ9Y620 910 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 PI4KAP42356 2102 aa8.12□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 CAPN8A6NHC0 703 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 WASH3PC4AMC7 463 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 PCDHGA12O60330 932 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 TYRP14679 529 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 TBXAS1P24557 533 aaPredicted RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 EIF2S3P41091 472 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 TPMTP51580 245 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 COPB1P53618 953 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 EXOC3L4Q17RC7 722 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 ANO4Q32M45 955 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 FUT11Q495W5 492 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 HSP90AA4PQ58FG1 418 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 FKBP15Q5T1M5 1219 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 DCAF12L1Q5VU92 463 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms