RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FAM193AP78312 1265 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CLDN10P78369 228 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 EFEMP1Q12805 493 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 TRIP6Q15654 476 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZNF423Q2M1K9 1284 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZNF394Q53GI3 561 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 RESP18Q5W5W9 173 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 SLC9A9Q8IVB4 645 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZCCHC9Q8N567 271 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 KIAA0895Q8NCT3 520 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 SNX19Q92543 992 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CCDC47Q96A33 483 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 PAGE5Q96GU1 130 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CAMK1GQ96NX5 476 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 TWNKQ96RR1 684 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 HNRNPABQ99729 332 aaKnown RBP9.27□□□□□ -0.93
TDP1-208ENST00000553989 PRDM16Q9HAZ2 1276 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 NMUR1Q9HB89 426 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.27□□□□□ -0.93
TDP1-208ENST00000553989 ZNF510Q9Y2H8 683 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 ADAMTS9Q9P2N4 1935 aa9.27□□□□□ -0.93
TDP1-208ENST00000553989 PI4KAP42356 2102 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 LAMA1P25391 3075 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 KLRC4O43908 158 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 SH3BP5O60239 455 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 GREM1O60565 184 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 STC2O76061 302 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 TRIM49P0CI25 452 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 TRIM49CP0CI26 452 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 NCAM1P13591 858 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 TNNT1P13805 278 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 CD59P13987 128 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 CORO1AP31146 461 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 CHKAP35790 457 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 GCLMP48507 274 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 COG7P83436 770 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 GRIK2Q13002 908 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 SLC14A1Q13336 389 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 COL9A2Q14055 689 aaPredicted RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 FUT11Q495W5 492 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 KLHDC10Q6PID8 442 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 ANKS1BQ7Z6G8 1248 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 NAXDQ8IW45 347 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 SETD7Q8WTS6 366 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 PRCCQ92733 491 aaPredicted RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 TOE1Q96GM8 510 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 ZNF419Q96HQ0 510 aaPredicted RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 HEXIM2Q96MH2 286 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 ARID3AQ99856 593 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 GPR174Q9BXC1 333 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 CIPCQ9C0C6 399 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 KCTD10Q9H3F6 313 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 CYP3A43Q9HB55 503 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 PNPLA8Q9NP80 782 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 DNAAF2Q9NVR5 837 aaKnown RBP9.26□□□□□ -0.93
TDP1-208ENST00000553989 DMAC2Q9NW81 257 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 STRIP2Q9ULQ0 834 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 LHX6Q9UPM6 363 aa9.26□□□□□ -0.93
TDP1-208ENST00000553989 FAM208BQ5VWN6 2430 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 CEP192Q8TEP8 1941 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 IGF2RP11717 2491 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 FRYQ5TBA9 3013 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 CACNA1EQ15878 2313 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 A0A1B0GTW7 788 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 SLC12A8A0AV02 714 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 HHLA1C9JL84 531 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 NPC1O15118 1278 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
TDP1-208ENST00000553989 CILPO75339 1184 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 EPHX1P07099 455 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 CISD3P0C7P0 127 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 FTH1P19P0C7X4 201 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 SKILP12757 684 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 NR2F2P24468 414 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 IL12RB1P42701 662 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 KIF11P52732 1056 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 MFAP3P55082 362 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 SLC8A3P57103 927 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 RING1Q06587 406 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 E2F5Q15329 346 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 GEN1Q17RS7 908 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
TDP1-208ENST00000553989 DCAF12L1Q5VU92 463 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 SERPINA13PQ6UXR4 307 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 Q6ZNB5 142 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 INTS8Q75QN2 995 aaKnown RBP9.25□□□□□ -0.93
TDP1-208ENST00000553989 TMPRSS6Q8IU80 811 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 DENND1CQ8IV53 801 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 FAM186BQ8IYM0 893 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 ARHGAP18Q8N392 663 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 PNPLA1Q8N8W4 532 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms