RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SLC24A5Q71RS6 500 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 PLPPR4Q7Z2D5 763 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CHD1LQ86WJ1 897 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CXorf67Q86X51 503 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CCDC105Q8IYK2 499 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 THNSL1Q8IYQ7 743 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 KIAA2013Q8IYS2 634 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 RNF168Q8IYW5 571 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CMTM4Q8IZR5 234 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 THAP3Q8WTV1 239 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ST8SIA2Q92186 375 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 GLG1Q92896 1179 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 MAP4K1Q92918 833 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 KLHL5Q96PQ7 755 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 DEPDC7Q96QD5 511 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 TUBGCP5Q96RT8 1024 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ANO3Q9BYT9 981 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 KRT23Q9C075 422 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 LSG1Q9H089 658 aaKnown RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ELAC1Q9H777 363 aaKnown RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ACSS2Q9NR19 701 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 TMEM161AQ9NX61 479 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 DLL3Q9NYJ7 618 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 WRAP73Q9P2S5 460 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 NCDNQ9UBB6 729 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 SLC9A2Q9UBY0 812 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 ZNF215Q9UL58 517 aaPredicted RBP3.56□□□□□ -1.84
SLIRP-202ENST00000553981 DUSP12Q9UNI6 340 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 FAM50BQ9Y247 325 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 LZTS1Q9Y250 596 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 PCDHB7Q9Y5E2 793 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 CACNA1IQ9P0X4 2223 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 PATJQ8NI35 1801 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 COL4A2P08572 1712 aa3.56□□□□□ -1.84
SLIRP-202ENST00000553981 PIEZO1Q92508 2521 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 VWA8A3KMH1 1905 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 MYH15Q9Y2K3 1946 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 MTCL1Q9Y4B5 1905 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 IGKV6-21A0A0C4DH24 114 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CCDC163A0A0D9SF12 145 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 RRN3P2A6NIE6 340 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 DAPK3O43293 454 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 HBP1O60381 514 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 OFD1O75665 1012 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CXCL14O95715 111 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CNPP09543 421 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 SP9P0CG40 484 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 STAG3L1P0CL83 205 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CTSAP10619 480 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 HK1P19367 917 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ATP2B1P20020 1258 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 LMO1P25800 156 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ZFP36P26651 326 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CLCN4P51793 760 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CLCN5P51795 746 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CRYBB1P53674 252 aaPredicted RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 NPEPPSP55786 919 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 NLRP11P59045 1033 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 NTHL1P78549 312 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 MYBPC3Q14896 1274 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 PTPN14Q15678 1187 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 NPY5RQ15761 445 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 IMMTQ16891 758 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ADCK5Q3MIX3 580 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 DCAF17Q5H9S7 520 aaPredicted RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 SPOUT1Q5T280 376 aaKnown RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 TTC22Q5TAA0 569 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 JAKMIP3Q5VZ66 844 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 B3GNT9Q6UX72 402 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 TMTC3Q6ZXV5 915 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 GPR149Q86SP6 731 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 PRIMA1Q86XR5 153 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 VPS52Q8N1B4 723 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CHST14Q8NCH0 376 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ZSWIM2Q8NEG5 633 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CASP10Q92851 521 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ZNF707Q96C28 371 aaPredicted RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 IGSF21Q96ID5 467 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 B3GALT6Q96L58 329 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 DNAJC7Q99615 494 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
SLIRP-202ENST00000553981 UBAC1Q9BSL1 405 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 FTHL17Q9BXU8 183 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 PLA2G2FQ9BZM2 168 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 TMEM117Q9H0C3 514 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 PCIF1Q9H4Z3 704 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 MINDY3Q9H8M7 445 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 PSTPIP2Q9H939 334 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ATP6V0A4Q9HBG4 840 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ENTPD7Q9NQZ7 604 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 TBC1D13Q9NVG8 400 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 SNTG2Q9NY99 539 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 ZNHIT2Q9UHR6 403 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CA14Q9ULX7 337 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 TRIOO75962 3097 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 CACNA1HO95180 2353 aa3.55□□□□□ -1.84
SLIRP-202ENST00000553981 MYH9P35579 1960 aaKnown RBP3.54□□□□□ -1.84
SLIRP-202ENST00000553981 PTPRZ1P23471 2315 aaPredicted RBP3.54□□□□□ -1.84
SLIRP-202ENST00000553981 A0A087WZ62 844 aa3.54□□□□□ -1.84
SLIRP-202ENST00000553981 A0A0U1RQF3 1178 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms