RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ADRA1BP35368 520 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 ARL4AP40617 200 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 CCR2P41597 374 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 NRG1Q02297 640 aaPredicted RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 PPP2R5EQ16537 467 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 SMTNL2Q2TAL5 461 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 SH3PXD2AQ5TCZ1 1133 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 GET4Q7L5D6 327 aaPredicted RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 CCDC50Q8IVM0 306 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 RCOR2Q8IZ40 523 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 DEFB123Q8N688 67 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 MAIP1Q8WWC4 291 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 MYLIPQ8WY64 445 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 HSPH1Q92598 858 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 ZNF592Q92610 1267 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 E2F7Q96AV8 911 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 MSLNLQ96KJ4 702 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 PEBP4Q96S96 227 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 OSBPL9Q96SU4 736 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 CDX2Q99626 313 aaPredicted RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 KLF16Q9BXK1 252 aaPredicted RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 OSBPL2Q9H1P3 480 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 DONSONQ9NYP3 566 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 PACSIN2Q9UNF0 486 aaPredicted RBP15.04■□□□□ -0
SHMT2-210ENST00000553950 SH3BP1Q9Y3L3 701 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 CPQQ9Y646 472 aa15.04■□□□□ -0
SHMT2-210ENST00000553950 BRWD1Q9NSI6 2320 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 TYW5A2RUC4 315 aaKnown RBP15.03■□□□□ -0
SHMT2-210ENST00000553950 KCNU1A8MYU2 1149 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 MOSPD3O75425 235 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 STC2O76061 302 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 TBX18O95935 607 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CEBPBP17676 345 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 IL1R2P27930 398 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 PEX5P50542 639 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 DNA2P51530 1060 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CDH6P55285 790 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 NTHL1P78549 312 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CKAP4Q07065 602 aaKnown RBP15.03■□□□□ -0
SHMT2-210ENST00000553950 USP4Q13107 963 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 ZC3H12AQ5D1E8 599 aaKnown RBP15.03■□□□□ -0
SHMT2-210ENST00000553950 CCDC181Q5TID7 509 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 DAB2IPQ5VWQ8 1189 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 LRRC31Q6UY01 552 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CYP4V2Q6ZWL3 525 aaPredicted RBP15.03■□□□□ -0
SHMT2-210ENST00000553950 NPAS3Q8IXF0 933 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CCDC185Q8N715 623 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 KCTD6Q8NC69 237 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 KRT35Q92764 455 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 TCEAL4Q96EI5 215 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 ADAM33Q9BZ11 813 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 S1PR5Q9H228 398 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 DHX35Q9H5Z1 703 aaKnown RBP15.03■□□□□ -0
SHMT2-210ENST00000553950 RETREG1Q9H6L5 497 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 TDP1Q9NUW8 608 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 OBP2AQ9NY56 170 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CALCOCO1Q9P1Z2 691 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 CDH7Q9ULB5 785 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 EFR3BQ9Y2G0 817 aa15.03■□□□□ -0
SHMT2-210ENST00000553950 E2F8A0AVK6 867 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 SLC9A3R1O14745 358 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 FGF10O15520 208 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 MOCS2O96007 188 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 CORO1AP31146 461 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 L1CAMP32004 1257 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 ATXN1P54253 815 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 SMAD4Q13485 552 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 TFDP2Q14188 446 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 SKIV2LQ15477 1246 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 TFDP3Q5H9I0 405 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 TTC39BQ5VTQ0 682 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 CELF5Q8N6W0 485 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 FAM71BQ8TC56 605 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 ALG3Q92685 438 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 ZFRQ96KR1 1074 aaKnown RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 C1orf74Q96LT6 269 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 CALN1Q9BXU9 219 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 SLC46A2Q9BY10 475 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 RNF38Q9H0F5 515 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 UBE2ZQ9H832 354 aaPredicted RBP15.02■□□□□ -0
SHMT2-210ENST00000553950 FAM50BQ9Y247 325 aa15.02■□□□□ -0
SHMT2-210ENST00000553950 F5H5T6 163 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 PGRMC1O00264 195 aaKnown RBP15.01□□□□□ -0.01
SHMT2-210ENST00000553950 PAGE1O75459 146 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 HMBSP08397 361 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 IRF1P10914 325 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 TCF4P15884 667 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 ZFXP17010 805 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-210ENST00000553950 GJA1P17302 382 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 KDELR1P24390 212 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 PAFAH1B1P43034 410 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 MARCKSL1P49006 195 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 HCAR3P49019 387 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 TPI1P60174 286 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 AMPD2Q01433 879 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 CBX2Q14781 532 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-210ENST00000553950 PPP6R3Q5H9R7 873 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-210ENST00000553950 KCNT1Q5JUK3 1230 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 RABGAP1LQ5R372 815 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms