RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FAM182AQ5T1J6 154 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PDZK1Q5T2W1 519 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 POMZP3Q6PJE2 187 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 Q6ZNX1 250 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 KIAA1958Q8N8K9 716 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 BEST2Q8NFU1 509 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 GATA6Q92908 595 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TMIGD2Q96BF3 282 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM89AQ96GI7 184 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 RDH8Q9NYR8 311 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ADGRA2Q96PE1 1338 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PRR23D1E9PI22 279 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 NRP2O60462 931 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PDE9AO76083 593 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 CLEC2LP0C7M8 214 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 PRR23D2P0DMB1 279 aaPredicted RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 TGFB3P10600 412 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 RRM2P31350 389 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 LGALS3BPQ08380 585 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 HES5Q5TA89 166 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF544Q6NX49 715 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 SCYL2Q6P3W7 929 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF598Q86UK7 904 aaKnown RBP9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 METTL4Q8N3J2 472 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 CKAP2Q8WWK9 683 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 MAN1C1Q9NR34 630 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 EHD3Q9NZN3 535 aa9.23□□□□□ -0.93
GTF2A1-203ENST00000553612 GMDSO60547 372 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 JRKO75564 520 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PGK2P07205 417 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ATP5OP48047 213 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PRKAA2P54646 552 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CA9Q16790 459 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 TEDDM1Q5T9Z0 273 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CPT1BQ92523 772 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 APOL5Q9BWW9 433 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 RAB20Q9NX57 234 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 MBD2Q9UBB5 411 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 RPP38P78345 283 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 TRIM71Q2Q1W2 868 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SSX9Q7RTT3 188 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CCDC60Q8IWA6 550 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 MYCT1Q8N699 235 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ALLCQ8N6M5 410 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 TRPV3Q8NET8 790 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 OR7A2PQ8NGA2 310 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 EXOSC4Q9NPD3 245 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 THG1LQ9NWX6 298 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF624Q9P2J8 865 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC13A2Q13183 592 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 BHLHB9Q6PI77 547 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 TMPRSS9Q7Z410 1059 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC51BQ86UW2 128 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CLYBLQ8N0X4 340 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 DEPDC1BQ8WUY9 529 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 LURAP1Q96LR2 239 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM111AQ96PZ2 611 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 MTFR1LQ9H019 292 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 LY9Q9HBG7 655 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PCDHB16Q9NRJ7 776 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 GCNT4Q9P109 453 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PLK4O00444 970 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 BEST1O76090 585 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CDK9P50750 372 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CYFIP1Q7L576 1253 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ALYREFQ86V81 257 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 JAMLQ86YT9 394 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ARMC8Q8IUR7 673 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CLEC4FQ8N1N0 589 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SPATA6Q9NWH7 488 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 HPF1Q9NWY4 346 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 CRTAMO95727 393 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ATP5BP06576 529 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SNRPAP09012 282 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 YWHAEP62258 255 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ENKURQ8TC29 256 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 MCMBPQ9BTE3 642 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 SETD4Q9NVD3 440 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
GTF2A1-203ENST00000553612 ABCC5O15440 1437 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 LOC105371267A0A1B0GV96 52 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 HSD17B2P37059 387 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 HNRNPFP52597 415 aaKnown RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 GPS1Q13098 491 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 GALEQ14376 348 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 MAN2A1Q16706 1144 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 ARL6IP4Q66PJ3 421 aaKnown RBP9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.93
GTF2A1-203ENST00000553612 METTL13Q8N6R0 699 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms