RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SFTPA1Q8IWL2 248 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 DDI1Q8WTU0 396 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 TRIM5Q9C035 493 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 DEC1Q9P2X7 70 aa23.71■■□□□ 1.39
TDP1-206ENST00000553569 TRIM24O15164 1050 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 AP5Z1O43299 807 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 KAT7O95251 611 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 TFE3P19532 575 aaPredicted RBP23.7■■□□□ 1.38
TDP1-206ENST00000553569 SEC13P55735 322 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 C1QBPQ07021 282 aaKnown RBP23.7■■□□□ 1.38
TDP1-206ENST00000553569 ANGPT1Q15389 498 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 OTUD1Q5VV17 481 aaPredicted RBP23.7■■□□□ 1.38
TDP1-206ENST00000553569 FYB2Q5VWT5 728 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 NADSYN1Q6IA69 706 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 GRAMD4Q6IC98 578 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 ACAD10Q6JQN1 1059 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 TRNP1Q6NT89 227 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 RFWD3Q6PCD5 774 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 SARM1Q6SZW1 724 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 SYNPOQ8N3V7 929 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 EMC1Q8N766 993 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 SYN2Q92777 582 aaPredicted RBP23.7■■□□□ 1.38
TDP1-206ENST00000553569 NPY6RQ99463 290 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 ADAM33Q9BZ11 813 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 KCNH6Q9H252 994 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 RRN3Q9NYV6 651 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 XPO7Q9UIA9 1087 aaKnown RBP23.7■■□□□ 1.38
TDP1-206ENST00000553569 STOML2Q9UJZ1 356 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 TMEM59LQ9UK28 342 aa23.7■■□□□ 1.38
TDP1-206ENST00000553569 LAMTOR5O43504 91 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 PENKP01210 267 aaPredicted RBP23.69■■□□□ 1.38
TDP1-206ENST00000553569 SLC6A4P31645 630 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 TCF15Q12870 199 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 TRIM14Q14142 442 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 FBXO43Q4G163 708 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 FAM133BQ5BKY9 247 aaKnown RBP23.69■■□□□ 1.38
TDP1-206ENST00000553569 PKN3Q6P5Z2 889 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 PHTF2Q8N3S3 785 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 TBCBQ99426 244 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 IER2Q9BTL4 223 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 SELENOOQ9BVL4 669 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 CALCOCO1Q9P1Z2 691 aa23.69■■□□□ 1.38
TDP1-206ENST00000553569 H0Y858 1186 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 DDX3XO00571 662 aaKnown RBP eCLIP23.68■■□□□ 1.385e-8■■□□□ 12.6
TDP1-206ENST00000553569 SERPING1P05155 500 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 CCR1P32246 355 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 GRIA2P42262 883 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 SGSHP51688 502 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 EIF4EBP2Q13542 120 aaPredicted RBP23.68■■□□□ 1.38
TDP1-206ENST00000553569 MPPE1Q53F39 396 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 HGSNATQ68CP4 663 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 DNAJC24Q6P3W2 148 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 DNAAF5Q86Y56 855 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 MCOLN2Q8IZK6 566 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 ATP6V0D2Q8N8Y2 350 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 TERB1Q8NA31 727 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 JOSD2Q8TAC2 188 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 AZIN2Q96A70 460 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 CFAP57Q96MR6 1250 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 DDX50Q9BQ39 737 aaKnown RBP23.68■■□□□ 1.38
TDP1-206ENST00000553569 PIGVQ9NUD9 493 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.68■■□□□ 1.38
TDP1-206ENST00000553569 CACNA1IQ9P0X4 2223 aa23.68■■□□□ 1.38
TDP1-206ENST00000553569 TBC1D3BA6NDS4 549 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 ANTXRLA6NF34 631 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 K7EQS6 105 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 PLEKP08567 350 aaPredicted RBP23.67■■□□□ 1.38
TDP1-206ENST00000553569 TPM1P09493 284 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 SLC2A3P11169 496 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 ABCB4P21439 1286 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 DGKGP49619 791 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 PTPN5P54829 565 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 GSCP56915 257 aaPredicted RBP23.67■■□□□ 1.38
TDP1-206ENST00000553569 SATB1Q01826 763 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 DEUP1Q05D60 604 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 SLC25A52Q3SY17 297 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 PREPLQ4J6C6 727 aaPredicted RBP23.67■■□□□ 1.38
TDP1-206ENST00000553569 RAP1GAP2Q684P5 730 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 CHSY1Q86X52 802 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 SPEM1Q8N4L4 309 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 C3orf20Q8ND61 904 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 RPLP0P6Q8NHW5 317 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 TMA16Q96EY4 203 aaKnown RBP23.67■■□□□ 1.38
TDP1-206ENST00000553569 BTN2A3PQ96KV6 586 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.67■■□□□ 1.38
TDP1-206ENST00000553569 SLC12A6Q9UHW9 1150 aa23.67■■□□□ 1.38
TDP1-206ENST00000553569 BZW2Q9Y6E2 419 aaKnown RBP23.67■■□□□ 1.38
TDP1-206ENST00000553569 GFRA2O00451 464 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 ATMINO43313 823 aaPredicted RBP23.66■■□□□ 1.38
TDP1-206ENST00000553569 KRT3P12035 628 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 RRM1P23921 792 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 HOXD9P28356 352 aaPredicted RBP23.66■■□□□ 1.38
TDP1-206ENST00000553569 ATXN1P54253 815 aaKnown RBP23.66■■□□□ 1.38
TDP1-206ENST00000553569 ATP11AP98196 1134 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 C10orf76Q5T2E6 689 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 PIK3R6Q5UE93 754 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 PPP1R2P3Q6NXS1 205 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 SND1Q7KZF4 910 aaKnown RBP eCLIP23.66■■□□□ 1.38
TDP1-206ENST00000553569 TMC6Q7Z403 805 aa23.66■■□□□ 1.38
TDP1-206ENST00000553569 RXFP2Q8WXD0 754 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms