RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 DDX50Q9BQ39 737 aaKnown RBP19.19■□□□□ 0.66
CPSF2-202ENST00000553427 FAM126AQ9BYI3 521 aaPredicted RBP19.19■□□□□ 0.66
CPSF2-202ENST00000553427 FAM204AQ9H8W3 233 aa19.19■□□□□ 0.66
CPSF2-202ENST00000553427 DNAJC17Q9NVM6 304 aaKnown RBP19.19■□□□□ 0.66
CPSF2-202ENST00000553427 SLC27A6Q9Y2P4 619 aa19.19■□□□□ 0.66
CPSF2-202ENST00000553427 MYOFQ9NZM1 2061 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 CBFA2T2O43439 604 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 GRAP2O75791 330 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 APOEP02649 317 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 SP9P0CG40 484 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 HOXA6P31267 233 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 GBP1P32455 592 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 PITX1P78337 314 aaPredicted RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 MRPS21P82921 87 aaKnown RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 HSF5Q4G112 596 aaPredicted RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 MPPE1Q53F39 396 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 FAM133BQ5BKY9 247 aaKnown RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 MPP7Q5T2T1 576 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 SFMBT2Q5VUG0 894 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 E4F1Q66K89 784 aaPredicted RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 MMS22LQ6ZRQ5 1243 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 NUDT18Q6ZVK8 323 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 NAT16Q8N8M0 369 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 USP33Q8TEY7 942 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 SYN2Q92777 582 aaPredicted RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 PGAP3Q96FM1 320 aaPredicted RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 NPY6RQ99463 290 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 SLC2A11Q9BYW1 496 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 XPO4Q9C0E2 1151 aaKnown RBP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 DDIT4Q9NX09 232 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.18■□□□□ 0.66
CPSF2-202ENST00000553427 TMEM59LQ9UK28 342 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 STAP1Q9ULZ2 295 aa19.18■□□□□ 0.66
CPSF2-202ENST00000553427 KCNU1A8MYU2 1149 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 CALB1P05937 261 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 CISD3P0C7P0 127 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 CCR1P32246 355 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 SATB1Q01826 763 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 KDSRQ06136 332 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 C1QBPQ07021 282 aaKnown RBP19.17■□□□□ 0.66
CPSF2-202ENST00000553427 OTUD1Q5VV17 481 aaPredicted RBP19.17■□□□□ 0.66
CPSF2-202ENST00000553427 PKN3Q6P5Z2 889 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 MON1BQ7L1V2 547 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 C11orf70Q9BRQ4 267 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 CAPN11Q9UMQ6 739 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 STARD13Q9Y3M8 1113 aa19.17■□□□□ 0.66
CPSF2-202ENST00000553427 HOXD9P28356 352 aaPredicted RBP19.16■□□□□ 0.66
CPSF2-202ENST00000553427 PLA2G5P39877 138 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 NBL1P41271 181 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 KIR2DL1P43626 348 aaPredicted RBP19.16■□□□□ 0.66
CPSF2-202ENST00000553427 DGKGP49619 791 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 ZBED6P86452 979 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 SLC25A52Q3SY17 297 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 C2CD6Q53TS8 623 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 ZC3H12AQ5D1E8 599 aaKnown RBP19.16■□□□□ 0.66
CPSF2-202ENST00000553427 PIK3R6Q5UE93 754 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 NADSYN1Q6IA69 706 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 SYT13Q7L8C5 426 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 ZNF557Q8N988 423 aaPredicted RBP19.16■□□□□ 0.66
CPSF2-202ENST00000553427 RNF214Q8ND24 703 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 RPLP0P6Q8NHW5 317 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 DDI1Q8WTU0 396 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 ATOH1Q92858 354 aaPredicted RBP19.16■□□□□ 0.66
CPSF2-202ENST00000553427 ADAM22Q9P0K1 906 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 PCDHGA2Q9Y5H1 932 aa19.16■□□□□ 0.66
CPSF2-202ENST00000553427 PIEZO1Q92508 2521 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 TBC1D3BA6NDS4 549 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 GOLGA8SH3BPF8 625 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 K7ESF4 209 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 F9P00740 461 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 GYPCP04921 128 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 FLT3P36888 993 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 NRLP54845 237 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 CSTF1Q05048 431 aaKnown RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 ZC3H14Q6PJT7 736 aaKnown RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 BNIPLQ7Z465 357 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 ATP6V0D2Q8N8Y2 350 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 HJURPQ8NCD3 748 aaPredicted RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 C3orf20Q8ND61 904 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 BHMTQ93088 406 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 TMA16Q96EY4 203 aaKnown RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 VCPIP1Q96JH7 1222 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 HAUS4Q9H6D7 363 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 SEPT11Q9NVA2 429 aaKnown RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 PLK2Q9NYY3 685 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 SLC12A6Q9UHW9 1150 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 PAXBP1Q9Y5B6 917 aa19.15■□□□□ 0.66
CPSF2-202ENST00000553427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 BZW2Q9Y6E2 419 aaKnown RBP19.15■□□□□ 0.66
CPSF2-202ENST00000553427 PROB1E7EW31 1015 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 M0QYT0 321 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 TRIM24O15164 1050 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 TNFAIP3P21580 790 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 SLC6A4P31645 630 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 CXCR3P49682 368 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 RNASE9P60153 205 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms