RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PVALEFA0A1B0GWK0 134 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 SLC12A8A0AV02 714 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 PCDHGA12O60330 932 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 CUTAO60888 179 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 FSBPO95073 299 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 SEMA4FO95754 770 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 CD58P19256 250 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 TRIM21P19474 475 aaKnown RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 HOXD9P28356 352 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 ABCG1P45844 678 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 CLDN6P56747 220 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 ARID5AQ03989 594 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 FAM217AQ8IXS0 508 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 KIAA0895Q8NCT3 520 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 GOLGA5Q8TBA6 731 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 PIP4K2CQ8TBX8 421 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 CDK5RAP1Q96SZ6 601 aaKnown RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 ARID3AQ99856 593 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 DCLK3Q9C098 648 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 TMEM245Q9H330 911 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-209ENST00000553308 MAGEF1Q9HAY2 307 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 MARCH2Q9P0N8 246 aa9.51□□□□□ -0.89
SYNE2-209ENST00000553308 TP53BP1Q12888 1972 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CBX4O00257 560 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 PLK4O00444 970 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 KLRC4O43908 158 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 TSPAN3O60637 253 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 C1QL1O75973 258 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 NR3C1P04150 777 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 TRIM49P0CI25 452 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 TRIM49CP0CI26 452 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CD27P26842 260 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 ITPKBP27987 946 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 HLA-FP30511 346 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CTSKP43235 329 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 RPS14P62263 151 aaKnown RBP9.5□□□□□ -0.89
SYNE2-209ENST00000553308 STK4Q13043 487 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 E2F5Q15329 346 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CEP135Q66GS9 1140 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CHST9Q7L1S5 443 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
SYNE2-209ENST00000553308 ZC3H3Q8IXZ2 948 aaKnown RBP9.5□□□□□ -0.89
SYNE2-209ENST00000553308 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 UBL7Q96S82 380 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-209ENST00000553308 ORAI3Q9BRQ5 295 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 SLC2A11Q9BYW1 496 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 IMPG2Q9BZV3 1241 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 NIF3L1Q9GZT8 377 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 BTBD1Q9H0C5 482 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 OSGEPQ9NPF4 335 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 PRSS16Q9NQE7 514 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 FTSJ1Q9UET6 329 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 STRIP2Q9ULQ0 834 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 PLXNA2O75051 1894 aa9.5□□□□□ -0.89
SYNE2-209ENST00000553308 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 IKBKBO14920 756 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 PAPSS1O43252 624 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 TIMM44O43615 452 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 TLX3O43711 291 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 YEATS4O95619 227 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 IGHV4-34P06331 123 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 C7P10643 843 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 GCLMP48507 274 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 SGSHP51688 502 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 VAMP7P51809 220 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 PPP3CAQ08209 521 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 KMT5BQ4FZB7 885 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 MPPE1Q53F39 396 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 PRAMEF14Q5SWL7 426 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 ADAT2Q7Z6V5 191 aaKnown RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 ADIPOR2Q86V24 386 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 GATAD2AQ86YP4 633 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 WFDC5Q8TCV5 224 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 WFIKKN2Q8TEU8 576 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 NDRG1Q92597 394 aaKnown RBP9.49□□□□□ -0.89
SYNE2-209ENST00000553308 COL26A1Q96A83 441 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 PLD4Q96BZ4 506 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 NXPE2Q96DL1 559 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 SLC6A18Q96N87 628 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 MMRN2Q9H8L6 949 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 ABCB8Q9NUT2 735 aa9.49□□□□□ -0.89
SYNE2-209ENST00000553308 EXOC1Q9NV70 894 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms