RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 BHMTQ93088 406 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 JAKMIP2Q96AA8 810 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 ERLEC1Q96DZ1 483 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 DNAI2Q9GZS0 605 aa12.42□□□□□ -0.42
CKAP4-202ENST00000552828 AGO1Q9UL18 857 aaKnown RBP12.42□□□□□ -0.42
CKAP4-202ENST00000552828 BICDL2A1A5D9 508 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TIMM44O43615 452 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 ZNF883P0CG24 379 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 NCAM1P13591 858 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 KRT13P13646 458 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 MAOBP27338 520 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 GTF2H1P32780 548 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 DEKP35659 375 aaKnown RBP12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TPMTP51580 245 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 RING1Q06587 406 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 EIF4HQ15056 248 aaKnown RBP12.41□□□□□ -0.42
CKAP4-202ENST00000552828 ANKS1BQ7Z6G8 1248 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 PROSER1Q86XN7 944 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 FAM186BQ8IYM0 893 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 ARHGAP18Q8N392 663 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 CPXM2Q8N436 756 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 TTC39CQ8N584 583 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 C1orf216Q8TAB5 229 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 NELFBQ8WX92 580 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 SLC2A11Q9BYW1 496 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 ELOVL2Q9NXB9 296 aa12.41□□□□□ -0.42
CKAP4-202ENST00000552828 FASNP49327 2511 aaKnown RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 TRIM49BA6NDI0 452 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 CD58P19256 250 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 CORO1AP31146 461 aaKnown RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 COPAP53621 1224 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PMS1P54277 932 aaKnown RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PAK1Q13153 545 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PM20D1Q6GTS8 502 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 FOXR2Q6PJQ5 311 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 CCNI2Q6ZMN8 369 aaPredicted RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 MLKLQ8NB16 471 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 GPR174Q9BXC1 333 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PCED1AQ9H1Q7 454 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 TMEM8AQ9HCN3 771 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 KIAA1522Q9P206 1035 aaPredicted RBP12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PCOLCE2Q9UKZ9 415 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 PCDHB9Q9Y5E1 797 aa12.4□□□□□ -0.42
CKAP4-202ENST00000552828 IGSF10Q6WRI0 2623 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 MEI4A8MW99 385 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 SLC16A3O15427 465 aaKnown RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 SYNCRIPO60506 623 aaKnown RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CYBBP04839 570 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 RAD23BP54727 409 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 BNC1Q01954 994 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 PDE4CQ08493 712 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 COL9A2Q14055 689 aaPredicted RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 ZNF234Q14588 700 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 TMEM215Q68D42 235 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 KRT39Q6A163 491 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 IL27RAQ6UWB1 636 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 PIGZQ86VD9 579 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 ZCCHC9Q8N567 271 aaKnown RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 ANKRD52Q8NB46 1076 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 SLC4A11Q8NBS3 891 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CCDC150Q8NCX0 1101 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
CKAP4-202ENST00000552828 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 PLD4Q96BZ4 506 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CISHQ9NSE2 258 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 RASAL2Q9UJF2 1139 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CELSR3Q9NYQ7 3312 aa12.39□□□□□ -0.43
CKAP4-202ENST00000552828 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms