RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 ARHGAP36Q6ZRI8 547 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CYP4V2Q6ZWL3 525 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PCGF5Q86SE9 256 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CROCCP2Q86T23 111 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ZNF410Q86VK4 478 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PARP9Q8IXQ6 854 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 IPMKQ8NFU5 416 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CCHCR1Q8TD31 782 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 RNF139Q8WU17 664 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TMEM174Q8WUU8 243 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 P2RY11Q96G91 374 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TNIP3Q96KP6 325 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ZNF560Q96MR9 790 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TTC25Q96NG3 672 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 LRRC37BQ96QE4 947 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MANSC1Q9H8J5 431 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SPC25Q9HBM1 224 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 FAM105AQ9NUU6 356 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PAK5Q9P286 719 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 HEY2Q9UBP5 337 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PADI3Q9ULW8 664 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 RPS6KL1Q9Y6S9 549 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 WDR81Q562E7 1941 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ZNF646O15015 1829 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 LOC100653049A0A140TA62 436 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SLC15A5A6NIM6 579 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TRDMT1O14717 391 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 AOC2O75106 756 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 KRT34O76011 436 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 F2P00734 622 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CD4P01730 458 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ASGR1P07306 291 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 STIP1P31948 543 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CDH5P33151 784 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 GATMP50440 423 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ALDH18A1P54886 795 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PRKCZQ05513 592 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SNCBQ16143 134 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SV2CQ496J9 727 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TAF1BQ53T94 588 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 HSP90AA5PQ58FG0 334 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TRIM68Q6AZZ1 485 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MFSD5Q6N075 450 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CLEC20AQ6ZU45 233 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 NLRP9Q7RTR0 991 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ANKRD23Q86SG2 305 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 NUDCD3Q8IVD9 361 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TNS4Q8IZW8 715 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TRPV1Q8NER1 839 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SPATA22Q8NHS9 363 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TFB1MQ8WVM0 346 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 HTR3CQ8WXA8 447 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 EMID1Q96A84 441 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MAGEB18Q96M61 343 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SRPK1Q96SB4 655 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SLC4A5Q9BY07 1137 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TKTL2Q9H0I9 626 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TRPV6Q9H1D0 765 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PSAT1Q9Y617 370 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 IQANK1A0A1B0GTG1 560 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 XPOTO43592 962 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MGEA5O60502 916 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ASMTLO95671 621 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ENO1P06733 434 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 NPR3P17342 541 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SERPINB3P29508 390 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ALDH3A1P30838 453 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 GRK4P32298 578 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 RGS2P41220 211 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CPT1AP50416 773 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MAXP61244 160 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 NCALDP61601 193 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PEX6Q13608 980 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 KCNA10Q16322 511 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ACCSLQ4AC99 568 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 RAPH1Q70E73 1250 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PIGWQ7Z7B1 504 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 CAND1Q86VP6 1230 aaKnown RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 POU5F2Q8N7G0 328 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ATAD1Q8NBU5 361 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SLCO2A1Q92959 643 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 MYLPFQ96A32 169 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SMOQ99835 787 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TSSK1BQ9BXA7 367 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 WDCPQ9H6R7 721 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 PLEKHA5Q9HAU0 1116 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 XPNPEP3Q9NQH7 507 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ARHGEF4Q9NR80 690 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 TMLHEQ9NVH6 421 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SYBUQ9NX95 663 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ZFP69BQ9UJL9 534 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 FARP1Q9Y4F1 1045 aaPredicted RBP5.77□□□□□ -1.49
LIMA1-215ENST00000552823 ATP8B3O60423 1300 aa5.77□□□□□ -1.49
LIMA1-215ENST00000552823 SMIM35A0A1B0GVV1 85 aa5.76□□□□□ -1.49
LIMA1-215ENST00000552823 ARL5CA6NH57 179 aa5.76□□□□□ -1.49
LIMA1-215ENST00000552823 NEMP1O14524 444 aa5.76□□□□□ -1.49
LIMA1-215ENST00000552823 ZMPSTE24O75844 475 aa5.76□□□□□ -1.49
LIMA1-215ENST00000552823 ENDOD1O94919 500 aa5.76□□□□□ -1.49
LIMA1-215ENST00000552823 MT-CYBP00156 380 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms