RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 RCN1Q15293 331 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SMTNL2Q2TAL5 461 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 TEX44Q53QW1 395 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PLEKHG4Q58EX7 1191 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ACSBG2Q5FVE4 666 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 FSCBQ5H9T9 825 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 INTS6LQ5JSJ4 861 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SPANXN3Q5MJ09 141 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 CELF3Q5SZQ8 465 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NBPF12Q5TAG4 269 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 METTL21CQ5VZV1 264 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 HEATR6Q6AI08 1181 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SCARA3Q6AZY7 606 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 OR6B2Q6IFH4 312 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ANO7Q6IWH7 933 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SCARA5Q6ZMJ2 495 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PDZD4Q76G19 769 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SLC26A9Q7LBE3 791 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 TRMT1LQ7Z2T5 733 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SDCCAG8Q86SQ7 713 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ZBTB33Q86T24 672 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 TMEM110Q86TL2 294 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PRUNE1Q86TP1 453 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ZNF410Q86VK4 478 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NCAPG2Q86XI2 1143 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 MYLK4Q86YV6 388 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 CTAGE3PQ8IX95 158 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PLD5Q8N7P1 536 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PPM1NQ8N819 430 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 C1orf127Q8N9H9 656 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 STKLD1Q8NE28 680 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 RFWD2Q8NHY2 731 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PIWIL2Q8TC59 973 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 DEPDC1BQ8WUY9 529 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 RXFP2Q8WXD0 754 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 HSPH1Q92598 858 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PPP2R3CQ969Q6 453 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ISL2Q96A47 359 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 CMTM5Q96DZ9 223 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SERAC1Q96JX3 654 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NLRP4Q96MN2 994 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PPP1R2P1Q96PQ5 205 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 GPR20Q99678 358 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 USB1Q9BQ65 265 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 BRD8Q9H0E9 1235 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NRDE2Q9H7Z3 1164 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 USP29Q9HBJ7 922 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 PCDH18Q9HCL0 1135 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ARL8BQ9NVJ2 186 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ZDHHC7Q9NXF8 308 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NXF1Q9UBU9 619 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 NKX1-2Q9UD57 310 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SIX4Q9UIU6 781 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 DCTN4Q9UJW0 460 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 HBS1LQ9Y450 684 aaKnown RBP5.55□□□□□ -1.52
CCNT1-204ENST00000551989 SLC4A7Q9Y6M7 1214 aa5.55□□□□□ -1.52
CCNT1-204ENST00000551989 MIA3Q5JRA6 1907 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 MYO18AQ92614 2054 aaKnown RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 COL4A4P53420 1690 aaPredicted RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 A0A0A0MRY4 1105 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 TCRBV7S3A2A0A539 114 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 RBM47A0AV96 593 aaKnown RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 FAM170AA1A519 330 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 SDR42E2A6NKP2 422 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 FOXO6A8MYZ6 492 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 KPNA7A9QM74 516 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 B2RBV5 119 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 TMEM114B3SHH9 223 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 SLCO1B7G3V0H7 640 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 INO80B-WBP1J3KQ70 363 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 FZD9O00144 591 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 TERTO14746 1132 aaKnown RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 NCAM2O15394 837 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PSMD3O43242 534 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PEX1O43933 1283 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 CCNT2O60583 730 aaKnown RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 ENTPD5O75356 428 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 RFPL1O75677 317 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 ITGB3P05106 788 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 STAG3L1P0CL83 205 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 CXCL8P10145 99 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PIM1P11309 404 aaPredicted RBP5.54□□□□□ -1.52
CCNT1-204ENST00000551989 TCF3P15923 654 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 DPEP1P16444 411 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 GM2AP17900 193 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PGAM1P18669 254 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PAX7P23759 505 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 CRABP2P29373 138 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 ARL4AP40617 200 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 PNPLA4P41247 253 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 GRM5P41594 1212 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 ABL2P42684 1182 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 POLD2P49005 469 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 GLUD2P49448 558 aa5.54□□□□□ -1.52
CCNT1-204ENST00000551989 BCAT1P54687 386 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms