RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
BRF1-219ENST00000551787 DDX1Q92499 740 aaKnown RBP17.4■□□□□ 0.38
BRF1-219ENST00000551787 FCRL2Q96LA5 508 aaPredicted RBP17.4■□□□□ 0.38
BRF1-219ENST00000551787 POPDC2Q9HBU9 364 aa17.4■□□□□ 0.38
BRF1-219ENST00000551787 EBF1Q9UH73 591 aa17.4■□□□□ 0.38
BRF1-219ENST00000551787 STARD13Q9Y3M8 1113 aa17.4■□□□□ 0.38
BRF1-219ENST00000551787 CEP83Q9Y592 693 aa17.4■□□□□ 0.38
BRF1-219ENST00000551787 MYO18AQ92614 2054 aaKnown RBP17.4■□□□□ 0.38
BRF1-219ENST00000551787 SYNJ2BP-COX16A0A087WUM0 186 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 CCDC163A0A0D9SF12 145 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 WASH3PC4AMC7 463 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
BRF1-219ENST00000551787 MOCS2O96007 188 aaPredicted RBP17.39■□□□□ 0.37
BRF1-219ENST00000551787 SLC11A2P49281 568 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 RING1Q06587 406 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 C2CD6Q53TS8 623 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 NADSYN1Q6IA69 706 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 DHX40Q8IX18 779 aaKnown RBP17.39■□□□□ 0.37
BRF1-219ENST00000551787 FAM160A2Q8N612 972 aaPredicted RBP17.39■□□□□ 0.37
BRF1-219ENST00000551787 MDGA1Q8NFP4 955 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 SLC20A1Q8WUM9 679 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 HMGB4Q8WW32 186 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 SLC39A13Q96H72 371 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 CACNA2D2Q9NY47 1150 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 COX16Q9P0S2 106 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 XPO7Q9UIA9 1087 aaKnown RBP17.39■□□□□ 0.37
BRF1-219ENST00000551787 STOML2Q9UJZ1 356 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 TLR6Q9Y2C9 796 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 RAD54BQ9Y620 910 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 ZNF292O60281 2723 aa17.39■□□□□ 0.37
BRF1-219ENST00000551787 TCRBV21S2A2A0A5A6 115 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 LRRC10BA6NIK2 292 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 GFRA2O00451 464 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 ACSL4O60488 711 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 MMEP08473 750 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 HOXD9P28356 352 aaPredicted RBP17.38■□□□□ 0.37
BRF1-219ENST00000551787 NTSR1P30989 418 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
BRF1-219ENST00000551787 HSF5Q4G112 596 aaPredicted RBP17.38■□□□□ 0.37
BRF1-219ENST00000551787 FAM133BQ5BKY9 247 aaKnown RBP17.38■□□□□ 0.37
BRF1-219ENST00000551787 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 BEND5Q7L4P6 421 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
BRF1-219ENST00000551787 PGBD3Q8N328 593 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 TMEM35BQ8NCS4 154 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 NEK11Q8NG66 645 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 CPA5Q8WXQ8 436 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 SORCS1Q8WY21 1168 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 MYEOVQ96EZ4 313 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 SERPINB11Q96P15 392 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 TRIM62Q9BVG3 475 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 FAM204AQ9H8W3 233 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 STIM2Q9P246 746 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 BCCIPQ9P287 314 aaKnown RBP eCLIP17.38■□□□□ 0.37
BRF1-219ENST00000551787 GMEB2Q9UKD1 530 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 SLC27A6Q9Y2P4 619 aa17.38■□□□□ 0.37
BRF1-219ENST00000551787 SYCE3A1L190 88 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 TBL1XO60907 577 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 HOXB2P14652 356 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SOX5P35711 763 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 JAM2P57087 298 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 CDK17Q00537 523 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SLC6A3Q01959 620 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 ARID5AQ03989 594 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SPEM2Q0P670 501 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 PIK3R6Q5UE93 754 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SMYD5Q6GMV2 418 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 LAIR1Q6GTX8 287 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SDE2Q6IQ49 451 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 KIAA1211LQ6NV74 962 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 OLFML1Q6UWY5 402 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 TRMT11Q7Z4G4 463 aaKnown RBP17.37■□□□□ 0.37
BRF1-219ENST00000551787 ERICH1Q86X53 443 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 CFAP52Q8N1V2 620 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 FRMD1Q8N878 549 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 IPO4Q8TEX9 1081 aaKnown RBP17.37■□□□□ 0.37
BRF1-219ENST00000551787 RLN3Q8WXF3 142 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SLC2A13Q96QE2 648 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 SPAG5Q96R06 1193 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 CIPCQ9C0C6 399 aa17.37■□□□□ 0.37
BRF1-219ENST00000551787 NUCKS1Q9H1E3 243 aaKnown RBP17.37■□□□□ 0.37
BRF1-219ENST00000551787 POLMQ9NP87 494 aaPredicted RBP17.37■□□□□ 0.37
BRF1-219ENST00000551787 A0A1W2PQF6 199 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 TEX33O43247 280 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 HSF2BPO75031 334 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 ALDH1A2O94788 518 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 LATS1O95835 1130 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 GLI1P08151 1106 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 CHRNB2P17787 502 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 GBP1P32455 592 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 ZNF165P49910 485 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 SNX16P57768 344 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 RPS24P62847 133 aaKnown RBP17.36■□□□□ 0.37
BRF1-219ENST00000551787 CCDC6Q16204 474 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
BRF1-219ENST00000551787 USP39Q53GS9 565 aaKnown RBP17.36■□□□□ 0.37
BRF1-219ENST00000551787 NAA35Q5VZE5 725 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms