RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 LRP3O75074 770 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 CDH5P33151 784 aaPredicted RBP19.75■□□□□ 0.75
DDX54-208ENST00000551344 EGFLAMQ63HQ2 1017 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.75■□□□□ 0.75
DDX54-208ENST00000551344 C11orf74Q86VG3 221 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 ZDHHC17Q8IUH5 632 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 KIAA2013Q8IYS2 634 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 CHPFQ8IZ52 775 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 C1orf131Q8NDD1 294 aaKnown RBP19.75■□□□□ 0.75
DDX54-208ENST00000551344 UCMAQ8WVF2 138 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 FCRL2Q96LA5 508 aaPredicted RBP19.75■□□□□ 0.75
DDX54-208ENST00000551344 BPIFA3Q9BQP9 254 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 GANQ9H2C0 597 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 TJP2Q9UDY2 1190 aa19.75■□□□□ 0.75
DDX54-208ENST00000551344 ZNF292O60281 2723 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 TSPAN3O60637 253 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 HSF2BPO75031 334 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 TRUB2O95900 331 aaKnown RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 HOXD9P28356 352 aaPredicted RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 POLR2FP61218 127 aaKnown RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 CDK17Q00537 523 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 TAF5Q15542 800 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 GEN1Q17RS7 908 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 DCAF6Q58WW2 860 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 PIK3R6Q5UE93 754 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 OR6B2Q6IFH4 312 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 CAVIN1Q6NZI2 390 aaKnown RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 ANKS1BQ7Z6G8 1248 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 TAC4Q86UU9 113 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 KBTBD6Q86V97 674 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 MDGA1Q8NFP4 955 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 ADAM32Q8TC27 787 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 DDX1Q92499 740 aaKnown RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 SLC2A13Q96QE2 648 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 GABRG3Q99928 467 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 HSD3B7Q9H2F3 369 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 SYNCQ9H7C4 482 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 FAM207AQ9NSI2 230 aaPredicted RBP19.74■□□□□ 0.75
DDX54-208ENST00000551344 CLEC4EQ9ULY5 219 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 SIK3Q9Y2K2 1263 aa19.74■□□□□ 0.75
DDX54-208ENST00000551344 CFAP54Q96N23 3096 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ZBTB24O43167 697 aaPredicted RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 IGLV3-25P01717 112 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ERBB2P04626 1255 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 HOXB2P14652 356 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 TGM1P22735 817 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 GBP1P32455 592 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 KLK7P49862 253 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 SLC6A3Q01959 620 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 UBXN1Q04323 297 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 EIF4EBP2Q13542 120 aaPredicted RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 BYSLQ13895 437 aaKnown RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 EIF4HQ15056 248 aaKnown RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 PTPN20Q4JDL3 420 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ANO6Q4KMQ2 910 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 FAM133BQ5BKY9 247 aaKnown RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 OLFML1Q6UWY5 402 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ZNF677Q86XU0 584 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 DEFB106AQ8N104 65 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ZNF557Q8N988 423 aaPredicted RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 ZNF397Q8NF99 534 aaPredicted RBP19.73■□□□□ 0.75
DDX54-208ENST00000551344 OLIG1Q8TAK6 271 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 ACOX2Q99424 681 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDX54-208ENST00000551344 ELOVL2Q9NXB9 296 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 SDK1Q7Z5N4 2213 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 WDR87Q6ZQQ6 2873 aa19.73■□□□□ 0.75
DDX54-208ENST00000551344 GOLGA6L7A0A1B0GV03 622 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 A0A1W2PQF6 199 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 TCRBV21S2A2A0A5A6 115 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 SMTNL1A8MU46 457 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 RHOBTB1O94844 696 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 LSM8O95777 96 aaKnown RBP19.72■□□□□ 0.75
DDX54-208ENST00000551344 APOEP02649 317 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 SLC2A3P11169 496 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 SLC6A4P31645 630 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 WASP42768 502 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 GABRB2P47870 512 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 SYCP1Q15431 976 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 PLK5Q496M5 336 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 RNF43Q68DV7 783 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 NADSYN1Q6IA69 706 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 RFWD3Q6PCD5 774 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 FAM183BPQ6ZVS7 135 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 SLC26A9Q7LBE3 791 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 APTXQ7Z2E3 356 aaKnown RBP19.72■□□□□ 0.75
DDX54-208ENST00000551344 NOP9Q86U38 636 aaKnown RBP19.72■□□□□ 0.75
DDX54-208ENST00000551344 AOPEPQ8N6M6 819 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 ERGIC2Q96RQ1 377 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 TPSD1Q9BZJ3 242 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 BCCIPQ9P287 314 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX54-208ENST00000551344 THAP10Q9P2Z0 257 aaPredicted RBP19.72■□□□□ 0.75
DDX54-208ENST00000551344 SLC12A6Q9UHW9 1150 aa19.72■□□□□ 0.75
DDX54-208ENST00000551344 TYW5A2RUC4 315 aaKnown RBP19.71■□□□□ 0.75
DDX54-208ENST00000551344 DCLK1O15075 740 aa19.71■□□□□ 0.75
DDX54-208ENST00000551344 HLA-FP30511 346 aa19.71■□□□□ 0.75
DDX54-208ENST00000551344 NOS2P35228 1153 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms