RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SLC12A6Q9UHW9 1150 aa16.87■□□□□ 0.29
CHMP1A-209ENST00000550872 KANSL1LA0AUZ9 987 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 C2CD4BA6NLJ0 364 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 LATS1O95835 1130 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 GPD1P21695 349 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 CCR1P32246 355 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 VCPP55072 806 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 RPL7AP62424 266 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 ATP11AP98196 1134 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 EIF4EBP2Q13542 120 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 ANO4Q32M45 955 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 ADGRF1Q5T601 910 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 OTUD1Q5VV17 481 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 ATP6V0D2Q8N8Y2 350 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 AZIN2Q96A70 460 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 MCEEQ96PE7 176 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 PANX2Q96RD6 677 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 MRPS17Q9Y2R5 130 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 TRIOO75962 3097 aa16.86■□□□□ 0.29
CHMP1A-209ENST00000550872 COL4A2P08572 1712 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 GOLGA6L7A0A1B0GV03 622 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 SHISA7A6NL88 538 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 TRDMT1O14717 391 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 TSPAN3O60637 253 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PTPN9P43378 593 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 GALCP54803 685 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PPP2R5DQ14738 602 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 UBXN2BQ14CS0 331 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PON2Q15165 354 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 CDO1Q16878 200 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 CCDC14Q49A88 953 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PPP1R15BQ5SWA1 713 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 C1orf228Q6PIY5 440 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 BMP8AQ7Z5Y6 402 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 CPXM2Q8N436 756 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PGAP3Q96FM1 320 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 BTN2A3PQ96KV6 586 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 NELL2Q99435 816 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 BBS2Q9BXC9 721 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 ADAM33Q9BZ11 813 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 FOXQ1Q9C009 403 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 WDCPQ9H6R7 721 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 PIGVQ9NUD9 493 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 SPTLC3Q9NUV7 552 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 TMEM51Q9NW97 253 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 STOML2Q9UJZ1 356 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 NENFQ9UMX5 172 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 NDRG2Q9UN36 371 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 SCINQ9Y6U3 715 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
CHMP1A-209ENST00000550872 FAM170BA6NMN3 283 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 KCNU1A8MYU2 1149 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 NEDD8-MDP1E9PL57 170 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 CYBBP04839 570 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 RDXP35241 583 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 CXCR3P49682 368 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 GALK1P51570 392 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 ATXN1P54253 815 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 C15orf59Q2T9L4 293 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 NADSYN1Q6IA69 706 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 FAM217AQ8IXS0 508 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 NAT16Q8N8M0 369 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 CD101Q93033 1021 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 BHMTQ93088 406 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 EXOC4Q96A65 974 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 THAP2Q9H0W7 228 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 MRPL47Q9HD33 250 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 MARK1Q9P0L2 795 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 XPO7Q9UIA9 1087 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 COL4A3Q01955 1670 aa16.84■□□□□ 0.29
CHMP1A-209ENST00000550872 HOXC11O43248 304 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 ENDOD1O94919 500 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 H2AFZP0C0S5 128 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 TYRP14679 529 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 DESP17661 470 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 TARSP26639 723 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 OPRD1P41143 372 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 ZNF143P52747 638 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 MTA1Q13330 715 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 GAB4Q2WGN9 574 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 MPPE1Q53F39 396 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 FAM133BQ5BKY9 247 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 SH3PXD2AQ5TCZ1 1133 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 NAIF1Q69YI7 327 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 RFWD3Q6PCD5 774 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 H2AFVQ71UI9 128 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 FBXL6Q8N531 539 aa16.83■□□□□ 0.28
CHMP1A-209ENST00000550872 DDI1Q8WTU0 396 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms