RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ANKRD40Q6AI12 368 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ARMCX5Q6P1M9 558 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ARHGAP36Q6ZRI8 547 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 LRRC55Q6ZSA7 311 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 C16orf59Q7L2K0 433 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 DEFB128Q7Z7B8 93 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 USP37Q86T82 979 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ECHDC2Q86YB7 292 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 FAM114A1Q8IWE2 563 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CD302Q8IX05 232 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 GPD1LQ8N335 351 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CSGALNACT2Q8N6G5 542 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 PHOSPHO2Q8TCD6 241 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 HERVK_113Q902F9 699 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CPB2Q96IY4 423 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 LCORQ96JN0 433 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CBWD1Q9BRT8 395 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CCDC94Q9BW85 323 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 OSBPL2Q9H1P3 480 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 TSPY26PQ9H489 355 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 THAP9Q9H5L6 903 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 DLL4Q9NR61 685 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM161AQ9NX61 479 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CPSF3Q9UKF6 684 aaKnown RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ZMYND8Q9ULU4 1186 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 CBLCQ9ULV8 474 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 FRMD4BQ9Y2L6 1034 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 DERAQ9Y315 318 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 MKI67P46013 3256 aaKnown RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 TRIP12Q14669 1992 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-213ENST00000550629 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
SCAF11-213ENST00000550629 ALPK3Q96L96 1907 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF233A6NK53 670 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 TISP43B9A030 160 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 STX10O60499 249 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 MGEA5O60502 916 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 EXOC3O60645 756 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 CYP7B1O75881 506 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 NPTXRO95502 500 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 AMY2AP04746 511 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 CYP1A1P04798 512 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 KCNE1P15382 129 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 NAT1P18440 290 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 AMY2BP19961 511 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 EEF1GP26641 437 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 MAGEA10P43363 369 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 CYP2J2P51589 502 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 AP3M2P53677 418 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 SPAG1Q07617 926 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 SURF1Q15526 300 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 GPR19Q15760 415 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 XKR4Q5GH76 650 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM240Q5SV17 173 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 TRMT10BQ6PF06 316 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 GLB1LQ6UWU2 654 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 C11orf57Q6ZUT1 292 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 INTS8Q75QN2 995 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 FILIP1Q7Z7B0 1213 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 RTN4RL1Q86UN2 441 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 OSTM1Q86WC4 334 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 SLC7A14Q8TBB6 771 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 THAP3Q8WTV1 239 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 ZBTB45Q96K62 511 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 ACAP3Q96P50 834 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 MED15Q96RN5 788 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 GDF15Q99988 308 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 FAM213AQ9BRX8 229 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 EIF2AQ9BY44 585 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 HAPLN2Q9GZV7 340 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 IKZF4Q9H2S9 585 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 NXF3Q9H4D5 531 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 ASB7Q9H672 318 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 METTL14Q9HCE5 456 aaKnown RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 RBAKQ9NYW8 714 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 ARMCX3Q9UH62 379 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-213ENST00000550629 SRPK3Q9UPE1 567 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 GIT1Q9Y2X7 761 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 IPPQ9Y573 584 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 EVPLQ92817 2033 aa6.19□□□□□ -1.42
SCAF11-213ENST00000550629 MYH11P35749 1972 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 COL4A6Q14031 1691 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TTC26A0AVF1 554 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 FAM90A27PA6NNH2 459 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 H0YGN5 161 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 MAN2B1O00754 1011 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 CLIC2O15247 247 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TNRC18O15417 2968 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 AKAP3O75969 853 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ENO2P09104 434 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 EPB41P11171 864 aaKnown RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 KRT13P13646 458 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF18P17022 549 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms