RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 OXTRP30559 389 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 RDXP35241 583 aaKnown RBP22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 BCAT1P54687 386 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 GRIK2Q13002 908 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 CUL2Q13617 745 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 GOLGA7BQ2TAP0 167 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 MPPE1Q53F39 396 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 SORCS1Q8WY21 1168 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 PRCCQ92733 491 aaPredicted RBP22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 CAMK1GQ96NX5 476 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 CIPCQ9C0C6 399 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 ATP6V1DQ9Y5K8 247 aa22.68■■□□□ 1.22
SMARCC2-210ENST00000550519 SPEGQ15772 3267 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 METTL12A8MUP2 240 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 MEI4A8MW99 385 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 HOXD9P28356 352 aaPredicted RBP22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 PRCPP42785 496 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 BST2Q10589 180 aaKnown RBP22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 ZNF423Q2M1K9 1284 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 SGO2Q562F6 1265 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 TCERG1LQ5VWI1 586 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 RAB44Q7Z6P3 723 aaPredicted RBP22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 FMNL3Q8IVF7 1028 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 ZC3H3Q8IXZ2 948 aaKnown RBP22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 CHCHD4Q8N4Q1 142 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 CCDC34Q96HJ3 373 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 LRRC4Q9HBW1 653 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 STOML2Q9UJZ1 356 aa22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 HBS1LQ9Y450 684 aaKnown RBP22.67■■□□□ 1.22
SMARCC2-210ENST00000550519 ZFYVE26Q68DK2 2539 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 PKD1L2Q7Z442 2459 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 SRRM3A6NNA2 597 aaPredicted RBP22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 SLC16A3O15427 465 aaKnown RBP22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 EPHX1P07099 455 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 HARS2P49590 506 aaKnown RBP22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 PNOCQ13519 176 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 TRIP6Q15654 476 aaKnown RBP22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 COBLL1Q53SF7 1204 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 BSPRYQ5W0U4 402 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 SERPINA13PQ6UXR4 307 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 ZCCHC14Q8WYQ9 949 aaKnown RBP22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 NUP58Q9BVL2 599 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 HESX1Q9UBX0 185 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 SFMBT1Q9UHJ3 866 aa22.66■■□□□ 1.22
SMARCC2-210ENST00000550519 YJEFN3A6XGL0 299 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 E7ENQ6 273 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 C7P10643 843 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 HLA-FP30511 346 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 ZNF445P59923 1031 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 FKBP3Q00688 224 aaKnown RBP22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 ADIGQ0VDE8 80 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 CAMK2GQ13555 558 aaPredicted RBP22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 DCAF17Q5H9S7 520 aaPredicted RBP22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 DCAF12L1Q5VU92 463 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 NAXDQ8IW45 347 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 SCML4Q8N228 414 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 ZCCHC9Q8N567 271 aaKnown RBP22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 UBR7Q8N806 425 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 RNF139Q8WU17 664 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 KCTD13Q8WZ19 329 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 GDPD2Q9HCC8 539 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 RMND1Q9NWS8 449 aa22.65■■□□□ 1.22
SMARCC2-210ENST00000550519 O00370 1275 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 TSPAN3O60637 253 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 LATS1O95835 1130 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 ACADMP11310 421 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 VDRP11473 427 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 PMS1P54277 932 aaKnown RBP22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 YWHAEP62258 255 aaKnown RBP22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 PKDCCQ504Y2 493 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 ADGRF1Q5T601 910 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 ZNF658Q5TYW1 1059 aaPredicted RBP22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 ANKRD40Q6AI12 368 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 OR2T3Q8NH03 318 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 C1orf216Q8TAB5 229 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 UBA3Q8TBC4 463 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 WFIKKN2Q8TEU8 576 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 EDEM1Q92611 657 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 SLC35C1Q96A29 364 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 TMA16Q96EY4 203 aaKnown RBP22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 GSDMAQ96QA5 445 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 MIR1-1HGQ9H1L0 117 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 TMEM245Q9H330 911 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 ABCC13Q9NSE7 274 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 KIAA1257Q9ULG3 409 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 DMXL2Q8TDJ6 3036 aa22.64■■□□□ 1.21
SMARCC2-210ENST00000550519 CACNA1GO43497 2377 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 BCAT2O15382 392 aaPredicted RBP22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 CBFA2T3O75081 653 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 SETSIPP0DME0 302 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 HLA-EP13747 358 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 CD19P15391 556 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 ARID5AQ03989 594 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 KIAA0907Q7Z7F0 614 aaPredicted RBP22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 FMR1NBQ8N0W7 255 aaPredicted RBP22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 SIX6OS1Q8N1H7 587 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 TSG101Q99816 390 aa22.63■■□□□ 1.21
SMARCC2-210ENST00000550519 PCED1AQ9H1Q7 454 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms