RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 C6orf62Q9GZU0 229 aaPredicted RBP16.2■□□□□ 0.18
RBFOX1-212ENST00000550418 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
RBFOX1-212ENST00000550418 IFT172Q9UG01 1749 aa16.2■□□□□ 0.18
RBFOX1-212ENST00000550418 PDZK1P1A8MUH7 402 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TAF4O00268 1085 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CNOT3O75175 753 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ENTPD3O75355 529 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 LGR5O75473 907 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CYP1A2P05177 515 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CASP5P51878 434 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 MTTPP55157 894 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TAF5Q15542 800 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 HGSNATQ68CP4 663 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 AP4E1Q9UPM8 1137 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TKFCQ3LXA3 575 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 GALNTL6Q49A17 601 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 PIGWQ7Z7B1 504 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ALYREFQ86V81 257 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 PCDH20Q8N6Y1 951 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TMEM109Q9BVC6 243 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CATSPERBQ9H7T0 1116 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 AAR2Q9Y312 384 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 NDUFAF1Q9Y375 327 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 LIASO43766 372 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ZMPSTE24O75844 475 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CSPG5O95196 566 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 CDH3P22223 829 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 RGS4P49798 205 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 MAPRE1Q15691 268 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 XRRA1Q6P2D8 792 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 PLEKHM3Q6ZWE6 761 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ARCQ7LC44 396 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 VPS37AQ8NEZ2 397 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 PIF1Q9H611 641 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 GPAMQ9HCL2 828 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ERVK-5Q9HDB9 667 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 COMMD8Q9NX08 183 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 ZNRF3Q9ULT6 936 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TMA7Q9Y2S6 64 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 EME2A4GXA9 379 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 M0QYT0 321 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 HOXD10P28358 340 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 GEMP55040 296 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 MYL6P60660 151 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 SVOPQ8N4V2 548 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 RNF145Q96MT1 663 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TIMMDC1Q9NPL8 285 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 TUBGCP4Q9UGJ1 667 aa16.19■□□□□ 0.18
RBFOX1-212ENST00000550418 A0A1W2PPM1 405 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 C5orf60A6NFR6 353 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 SMIM22K7EJ46 135 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 UPP2O95045 317 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PIGNO95427 931 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CACNB2Q08289 660 aaPredicted RBP16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 TMC7Q7Z402 723 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 POLNQ7Z5Q5 900 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 TEX13BQ9BXU2 312 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 NMRAL1Q9HBL8 299 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PNPLA3Q9NST1 481 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 GGA3Q9NZ52 723 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 SALL4Q9UJQ4 1053 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PNMA8CA0A1B0GUJ8 204 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CHRM3P20309 590 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CYP2F1P24903 491 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 MRNIPQ6NTE8 343 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 DGCR6LQ9BY27 220 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 F8VP50 259 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PGK2P07205 417 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 TSHRP16473 764 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 PGAM1P18669 254 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 RPL14P50914 215 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 NFIL3Q16649 462 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 RINLQ6ZS11 566 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 SLC22A9Q8IVM8 553 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CAPSLQ8WWF8 208 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 CPNE1Q99829 537 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ROGDIQ9GZN7 287 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ACP6Q9NPH0 428 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 TJP2Q9UDY2 1190 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 R3HDM2Q9Y2K5 976 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 TNS2Q63HR2 1409 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ALOX15BO15296 676 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 SLITRK3O94933 977 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 RTN3O95197 1032 aaPredicted RBP16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 GJB6O95452 261 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 DPEP1P16444 411 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 ALOX12P18054 663 aa16.18■□□□□ 0.18
RBFOX1-212ENST00000550418 JAK1P23458 1154 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms